Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq423 107 2e-18 seq208 84.2 2e-11 >seq423 Length=50725 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | ||| | || || || || | || |||||||| ||||||||||| || | Sbjct 3597 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGAC 3656 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | |||||| | |||||| || || |||| || | |||||| || || || Sbjct 3657 AAAGTTCTGCCGTCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGGA 3716 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| || || |||| | || | ||| |||| ||||| | Sbjct 3717 ATTCCCTCCTTGTCTTGGATCTTTTGTTTGACATTGTCAATAGTGTCGGAAGACTCAACC 3776 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| |||||||| | ||| || |||||||| ||||| Sbjct 3777 TCAAGGGTGATGGTCTTACCGGTCAAAGTCTTAACGAAAATTTGCAT 3823 >seq208 Length=10633 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGC-GCGAGTCCTCTAGCTGCTTGCC 131096 || ||||||||||| |||||||| || || || | || | ||||| | |||||| || Sbjct 9482 GTTGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCA-TCCTCCAACTGCTTACC 9540 Query 131097 TGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTT 131156 || |||| || | |||||| || || |||||||| || || || ||| || ||||| Sbjct 9541 GGCAAAGATCAATCTCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTTTGCTT 9600 Query 131157 GAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGT 131216 || | || | || || | ||||| | || | ||| | || ||||| || | || Sbjct 9601 GACATTGTCAATGGTGTCTGAAGACTCCACCTCCAAGGTGATAGTCTTACCCGTCAAGGT 9660 Query 131217 TTTTACGAAAATCTGCAT 131234 || |||||||| ||||| Sbjct 9661 CTTAACGAAAATTTGCAT 9678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472007029643520