Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq423 98.7 8e-16 seq208 86.0 5e-12 >seq423 Length=50725 Score = 98.7 bits (108), Expect = 8e-16 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780 |||| |||| || || ||||||||||| || ||||||||||| | || ||| || || Sbjct 3609 CTCAAAACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGACAAAGTTCTGCCG 3668 Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840 |||||||| || || || ||| | || | | ||| || || || | ||||| ||| Sbjct 3669 TCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGGAATTCCCTCCTTG 3728 Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || || | || || || | | | | ||||||| | ||| || | ||||||| Sbjct 3729 TCTTGGATCTTTTGTTTGACATTGTCAATAGTGTCGGAAGACTCAACCTCAAGGGTGATG 3788 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 || || ||||||| || || || ||||| ||||||||| Sbjct 3789 GTCTTACCGGTCAAAGTCTTAACGAAAATTTGCATTTTG 3827 >seq208 Length=10633 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||||| | |||| |||| || || || ||||||||||| ||||||||||| | | Sbjct 9452 CCTCCTCTCAATCTCAAGACCAAGTGAAGAGTTGACTCCTTTTGGATGTTGTAGTCAGAC 9511 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || | |||||||| || || || ||| | || | | ||| || || || Sbjct 9512 AAAGTTCTGCCATCCTCCAACTGCTTACCGGCAAAGATCAATCTCTGCTGATCAGGTGGG 9571 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| || || || | ||||| || | | | | ||||| | |||| Sbjct 9572 ATTCCCTCCTTATCCTGGATCTTTTGCTTGACATTGTCAATGGTGTCTGAAGACTCCACC 9631 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 |||| |||||| || || || |||| || || || ||||| |||||||| Sbjct 9632 TCCAAGGTGATAGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCATTTT 9681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405083171604220