Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq14 260 2e-64
seq290 239 6e-58
>seq14
Length=27313
Score = 260 bits (288), Expect = 2e-64
Identities = 1317/2069 (64%), Gaps = 51/2069 (2%)
Strand=Plus/Plus
Query 61850 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 61909
|||||||| |||| | | |||| | ||||| | |||||||| || || || | |
Sbjct 16365 GTGAATTGGATGGCACGAGCAGCGGCCTGTGTACGCAAGTAGTACATACCTGTCTTCAAA 16424
Query 61910 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCG-GATCTGCTA 61967
|| |||| |||||||| ||||| ||| | || ||| | | ||| ||| |
Sbjct 16425 CCCTTCTTCCAGCCGTAAAAGTGCATGGACGTCAACTTACCCATAGTTGGCGAT-TGCAA 16483
Query 61968 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 62027
||||| ||||| |||||| || ||| |||| || ||||| |||||||| | |
Sbjct 16484 G-TGGATGTTCATGGATTGAGACTGGCAAATGTAGGCACCTCTGTCGGCAGCCATGTCGA 16542
Query 62028 TAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62087
| | | || || | || |||||||| ||| | || | | |||||| | |||||||
Sbjct 16543 TGACAGATTTCTGAGAAAGTTCCCAAACAGTCCTGTACAATTTCTTAATGTTGTCTGGAA 16602
Query 62088 GGTTTG-TA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCAT 62144
|| | || ||||||||||||||| || || || |||||| || |||| |
Sbjct 16603 TATTAGGTAAGTTCTGAATGGATCCATTGTCATGAATGATGAAATTCTTCATTGCATCGT 16662
Query 62145 TCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTC 62204
|||||| | | || | | | || || | | ||||| || | || || || |
Sbjct 16663 TCCATATTCCCATATCAATAAGGTCCCTTAGCATGTAAGGATTGACAATCTGGAACTCAC 16722
Query 62205 CAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTC 62264
||| | ||||| | || || ||| ||| | || || | |||| || | |
Sbjct 16723 CAGCAAGAACTCTTCTCTGATAGATGTTAGAGGTGAATGGCTCAAAGCACTCGTTGTAAC 16782
Query 62265 CCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGAC 62324
||| ||| |||| || || ||||| |||||||| || ||||| | |||||||||||
Sbjct 16783 CCATAATCTGAGAGGTAGAGGCAGTTGGCATAGGAGCGACCAAAAGCGAATTTCTAAGAC 16842
Query 62325 CGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNN 62384
| | | ||| || | || | || ||||||| ||| ||||| | || | |
Sbjct 16843 CATCCTTAGCGATCTTGGCCTTCAAAGTCTCCCAATCCCACAGATCAGTTGG--CTTCTT 16900
Query 62385 NNNNNNNNNNNNNT--TGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTA 62442
| || |||||||| || || || ||| | || || |||||
Sbjct 16901 ATTCCACATATCGTACTGGAGAATACCCTTGGAAGCTGGAGAGCCTTCGTAGGTCTCGTA 16960
Query 62443 TGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTC 62502
| || || | | ||| || | | |||| | ||||| | || | ||| ||
Sbjct 16961 CGTACCCTCTTCCACAGAAAGCTGATTTGATTCCTCCAGAGCACCATGGTACAAGGTCTC 17020
Query 62503 GAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAG-AGAA 62561
||| |||| | || || || | ||||| ||| |||||||| ||| | || | |
Sbjct 17021 GAATATCTGTATGTTAAGCTCACGAGCTTCTGGGCAGTCAAATGGC-AATCTGAGCATGA 17079
Query 62562 TAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGA 62621
|||| || || | ||||||||||||| | |||||||||| | |||| | || |||
Sbjct 17080 AGAACGTATCCGCAAGACCTTGAACACCAAGAGCGATAGGTCTGTTTCTCATGTTGGAGT 17139
Query 62622 TTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC---TGA 62678
| || ||||||| || || ||||| | || || | || | || | |||
Sbjct 17140 TGCGGGCCTCTGGAACTGGGTAGTAATTCCTGTCAATGACACGGTTCAAGTTACGTGTGA 17199
Query 62679 CAA------TTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATCTATTA 62732
||| | | ||| || | || | |||| || | | || | | |
Sbjct 17200 CAACCTTGGTGATCTTGTGCAACTTCTCAAAGTTGAACCAAC--AGTGATCCTTGTCGGA 17257
Query 62733 CA-AACATGTTCA---ATGCAACAGAT-GCCAGATTACAAACGGCTACCTCATTAGCATC 62787
| |||| | || | |||| | | |||| ||||| || | ||||||| | |
Sbjct 17258 CTCAACAAATGCAGGCAAGCAAATGTTTGCCAAGTTACACACACCGACCTCATCTGGAGA 17317
Query 62788 CGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTG 62847
| || | | | |||| ||| | ||| | ||||||||||||| || || | |||
Sbjct 17318 AGAGTACTCGACAACCTCACAGCACAAATTCGAAGACTTGATGGTTCCCAAGTTCTTTTG 17377
Query 62848 ATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTG 62907
|||||||||| |||| || |||||||| |||| ||||| || ||||| ||||| ||||
Sbjct 17378 ATTACTCTTTCTGTTGCAGGCATCCTTGTAAATCATGAAAGGCGTACCGGTTTCTGTCTG 17437
Query 62908 AGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATAGAT-TTGTATCTCTTT 62965
|| || | |||| | ||| | | || ||||||| | | | || | || |
Sbjct 17438 AGCCTCCAAAATCTGATACCACAACTTCT-GAGCCTTAACGGTTCTTCTTCCACGTCCCT 17496
Query 62966 TCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCA 63025
|| | ||||| | || ||||| ||| |||||||| || |||||| || ||
Sbjct 17497 CCT-TCTCGTAACGAGTGTACAACTTTTCAAACTCGTCACCATAAACATCTGAAAGACCT 17555
Query 63026 GGACATTCATCCGGACACATCAACGACCAC-TCTCCGTCATCCTTCA-CTCGTTTCATAA 63083
|| ||| ||| | | ||| | ||| | || | | |||| | || ||||| |
Sbjct 17556 GGGGCCTCAGAAGGAGAAAACAAAGTCCATGTATCATT--TTGTTCAACACGCTTCATGA 17613
Query 63084 AGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTG 63143
| |||||||| |||||||||||| || | ||| | | | ||||| || ||
Sbjct 17614 ATAGATCAGGGATCCAAAGAGCTGGGAACAAATCACGTGCACGGATCTCCTCCTTACCGT 17673
Query 63144 TATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGG 63203
|||||| | | ||||| ||| | | ||||| | |||||| ||||| ||||| || |
Sbjct 17674 GATTCTTCCTGATATCGATGAAGTCAAAGATATCTGCATGCCAAGGTTCTAAGTAGATAG 17733
Query 63204 CCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAA 63263
| || | || || | ||||| || || || || | || ||||| || | || | |
Sbjct 17734 CAATGGCACCTGGTCTCTTGTTACCACCTTGGTCAACATACCTAGCAGTACTGTTGAACA 17793
Query 63264 CTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCAC 63323
| | | ||| ||||||||||||||||||||||| ||||| || | || || ||
Sbjct 17794 CACGAACCATAGGAATAATACCATTGGATGTACCGTTGGTACCAGCAATGTATGAACCTG 17853
Query 63324 TGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGC 63383
| | |||||| ||| ||| |||||| || || || ||| | || || || || || |
Sbjct 17854 TAGAACGAATGTTATGAATATGTAGACCAATACCACCAGCCGTCTTGGAAATCAAGGCAC 17913
Query 63384 ATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAAC 63443
| |||| || || || ||||| || || ||| |||||| |||| || || || |
Sbjct 17914 ACTGTTTCAAAGTGTCGTAGATACCTTCAATAGAGTCATCCTTCATTGCAACTAAGAAGC 17973
Query 63444 AGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAA 63503
| ||||| || | || ||| || |||||||| || || ||||| ||||| || |
Sbjct 17974 AAGACGACATCTGTGGGCGTGGAGTACCGGCATTAAACAATGTTGGAGAGGCGTGTGTGA 18033
Query 63504 ACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGA 63562
| || | | || | | || |||| ||| | | || ||||| || | |||
Sbjct 18034 AGTATCTCTTCGACATCAAATCATACGACTCCAAAACTTTAGGAATATCATCACCG-TGA 18092
Query 63563 ATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATT 63622
||||| || || || | ||| | | |||||||| || || | | ||| |||||
Sbjct 18093 ATTCCAACGGCAACTCTCATAAGAAGATGCTGAGGCCTCTCTGCAACCTTACCATTTATC 18152
Query 63623 TTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTC 63680
|||||| || || || | || ||||| ||||| ||||| || ||||| || |
Sbjct 18153 CTCAACAGATATGAACGCTCTAGGGTCTTAAAGCCAAAGTAGTTATAGCTGAAA--TCAC 18210
Query 63681 GTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAA 63740
| || || |||| ||||||| | | |||||| | || | || ||| | ||||
Sbjct 18211 GGTCATAGTTAATGGCCGAGTTCAACTCATCCTTGTGCTTCATGAC--AATC--TTGTAA 18266
Query 63741 --TACTT--GAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAA 63796
| ||| || || ||||| | | ||| |||| || || ||||||| | | |
Sbjct 18267 ACTTCTTCAGAGATCATAGGGGATTTCTTCTGGGTTTTTGGGTTATAATAGTTGTAAAGA 18326
Query 63797 TCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATT 63856
|| || || || ||| ||| | || || || | ||||| | ||| || | ||| | |
Sbjct 18327 TCTTCAATAACATCAGAGAATGGCTTCTTAGTCTGCTTGTGCAAATTAGAAATGGCAAGT 18386
Query 63857 CTAGCGGCTAGAATGGCATAATCCGGATG 63885
|| ||||| | | | |||||||| |||||
Sbjct 18387 CTGGCGGCCAAAGTAGCATAATCTGGATG 18415
>seq290
Length=58723
Score = 239 bits (264), Expect = 6e-58
Identities = 607/908 (67%), Gaps = 18/908 (2%)
Strand=Plus/Plus
Query 32349 TCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTT 32408
|||| | |||||| || || ||||| ||| || | || || || || |||||
Sbjct 52776 TCTTTTGCCATAACACCAGCCTTCTGGTAGTCAGAAACTCTCTTCTCAAAGAAGTTAGTC 52835
Query 32409 TTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAttttt 32468
||||| | || || || || ||||| || ||||||||||||||| |||| |||| |||
Sbjct 52836 TTACCAGCCAAGGAAATGTTCTCCATAAAGTCGAATGGATTGGTAGCATTGTAAACTTTC 52895
Query 32469 ttAAATCCCAATTCAGAAATCAATCTATCTGCGACA-AATTCTATATATGTTTTCATCAT 32527
| | ||||||| || || |||||| || || ||| ||||| | ||| ||||||
Sbjct 52896 TCACATCCCAAAGCAATAAGCAATCTGTCGGC-ACAGAATTCAACATAATGGGCCATCAT 52954
Query 32528 TTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTA-AGAAATTCTTGTTCAA 32586
|| | ||||| || | | |||||| ||||| || | ||||| |||| | |||
Sbjct 52955 ATCGAAGTTCATACCAAGCAAAGAAACTGGGAGAGCATCACTCCAGAAAGTCTTCT-CAA 53013
Query 32587 TAGAGACCGCGTCTGTTATAATAGATCTTACTGTTT-CTTCACTCGGTGGATACAATAAA 32645
|| ||| || || || ||||| ||||| | | | | ||| ||||||| | |||
Sbjct 53014 TATTGACAGCCTCGGTCATAATTT-TCTTAATAATAACCTTACTAGGTGGATGCTTCAAA 53072
Query 32646 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 32705
|| |||| | ||||||||||| ||||||||||| || || | ||| | ||
Sbjct 53073 TGAGAGAACAAGAGGCATGCGAAATCAGTATGTAGACCCTCATCCCTGCAAATAAGCTCA 53132
Query 32706 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 32765
||||| || || ||||| ||||| | || | ||| || | ||| || || || |||||
Sbjct 53133 TTGGAGAAGGTAAGTCCAGGCATCAAACCTCTCTTCTTCAACCAGAAGATAGAGGCAAAC 53192
Query 32766 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCG 32825
|| ||||| ||||||| || || | || |||||||| | | |||||| ||||
Sbjct 53193 GAGCCAGAGAAGAAAACACCCTCGATGGCAGCAAAGGCGACCAATCTCTCAGCATACAAA 53252
Query 32826 GCGCTGTCA---TGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATT 32882
|| ||| | |||||| | |||||| ||||| | || | | || ||
Sbjct 53253 GCATCATCATTGTTTATCCATCTCAAAGCCCATAGAGCCTTTTCCTTAATAGGTGGAATG 53312
Query 32883 GTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATC 32942
|| | |||||||| || | |||| || || | || | | || || ||||
Sbjct 53313 GTATGGATAGCATTGAACAAGTAGTCGGACTCCTTCTTGTCGGTGATGTACGTTTCAAGT 53372
Query 32943 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCAT 33002
||||| || | || || || ||||| |||| || || || ||||| ||| |
Sbjct 53373 AAAAGGGAGTAGGTCTCAGAGTGGATGTTCTCAACCATAATCTGGAAACCGTAAAAGGCT 53432
Query 33003 CTAGCCTC-GGTAATCTGTA-CTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTA 33060
|| || || |||||| || | || || | |||| || ||| || || || | || |
Sbjct 53433 CTTGCTTCTGGTAAT-TGAACCTGCTTCATGAAAT-TTTGTGCCAAGTTCTCGTCAACAA 53490
Query 33061 TTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTG 33120
| || ||| || |||||||| ||||| ||| | |||||| ||| | |||| |||
Sbjct 53491 TACCATCAGAAGCGGCAAAAAATGCCAAAACACGCGATATAAAGTATCTCTCGT-TGGCA 53549
Query 33121 TTAGT----TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAA 33176
|| | || ||||| ||| | | || ||||| | ||| | || || | ||||||
Sbjct 53550 TTCATCTTGTTGTTCCAGTCAGTCAAGTCCTTAGAGAGATCAATCTCCTCAGCAGTCCAA 53609
Query 33177 AATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATA 33236
|| || ||||| ||||| |||||||| | ||| || |||| || ||||| || || ||
Sbjct 53610 AAAGAGGCCTCCGCCTTCTTATACATTTGCCATATATCATCGTACTGAATAGGGAACATC 53669
Query 33237 ACAAATCT 33244
||||||||
Sbjct 53670 ACAAATCT 53677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633624253848800
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