Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq423 159 3e-34 seq208 134 1e-26 seq14 87.8 2e-12 >seq423 Length=50725 Score = 159 bits (176), Expect = 3e-34 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||||||||| ||||| ||||| |||||||| || |||| ||||| || || | Sbjct 3826 AAAATGCAAATTTTCGTTAAGACTTTGACCGGTAAGACCATCACCCTTGAGGTTGAGTCT 3767 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 |||| || | ||| || |||||||||| || |||||||||||||| |||||||| ||| Sbjct 3766 TCCGACACTATTGACAATGTCAAACAAAAGATCCAAGACAAGGAGGGAATTCCACCTGAT 3707 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || | | || ||||| || || ||||| ||||| | | || | || || ||| Sbjct 3706 CAGCAGAGATTGATCTTTGCTGGTAAGCAGTTGGAGGACGGCAGAACTTTGTCTGACTAC 3647 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||| || || ||||| | || || |||||| ||||| | || ||| Sbjct 3646 AACATTCAGAAGGAGTCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGGT 3596 >seq208 Length=10633 Score = 134 bits (148), Expect = 1e-26 Identities = 169/232 (73%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||| ||||||||||| ||||| || || || ||||| || |||| | || ||||| | Sbjct 9682 AAAAATGCAAATTTTCGTTAAGACCTTGACGGGTAAGACTATCACCTTGGAGGTGGAGTC 9623 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 | || ||| | ||| || |||| ||||| || || || |||||||| || ||||| || Sbjct 9622 TTCAGACACCATTGACAATGTCAAGCAAAAGATCCAGGATAAGGAGGGAATCCCACCTGA 9563 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 ||| || | | || |||||||| || ||||| |||||| | | || | || || || Sbjct 9562 TCAGCAGAGATTGATCTTTGCCGGTAAGCAGTTGGAGGATGGCAGAACTTTGTCTGACTA 9503 Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||| ||||| || || || | || || || ||| ||||| | |||||| Sbjct 9502 CAACATCCAAAAGGAGTCAACTCTTCACTTGGTCTTGAGATTGAGAGGAGGT 9451 >seq14 Length=27313 Score = 87.8 bits (96), Expect = 2e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 129738 GTACTCGACAATTTCGGCGCACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGATT 129797 ||||||||||| || ||||||||| | || ||||| ||||| | ||||||||| Sbjct 17321 GTACTCGACAACCTCACAGCACAAATTCGAAGACTTGATGGTTCCCAAGTTCTTTTGATT 17380 Query 129798 ACTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGCGTGCCCGTTTC 129848 ||| || ||||||| ||||| ||||| |||||| | ||||| || ||||| Sbjct 17381 ACTCTTTCTGTTGCAGGCATCCTTGTAAATCATGAAAGGCGTACCGGTTTC 17431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419722997104570