Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq187 185 2e-41
>seq187
Length=11729
Score = 185 bits (204), Expect = 2e-41
Identities = 624/957 (65%), Gaps = 15/957 (2%)
Strand=Plus/Minus
Query 244297 GCCCCACATGTCAAACTGCAGCAGCCCCTT-GCTGACGGGGCTGCCCTCGTAGGTCGGGT 244355
|||||||||||| |||| || | ||| || || | ||||| |||| | | |||| |
Sbjct 3009 GCCCCACATGTCGTACTGGAGAACCCCGTTTGCCGCCGGGGA-GCCCCAGAATGTCGAAT 2951
Query 244356 AGGGACCGTCGCGCTGGGCCAGCTTACAGCT--CTCGTCGAGGGCGGCGTAGTAGATGGT 244413
| || || || ||| ||||||| | | || || ||| ||||| |||| |||||||||
Sbjct 2950 AAGGGCCCTCCCGCCGGGCCAGGT--CCGCCGACTGGTCCAGGGCCGCGTGGTAGATGGT 2893
Query 244414 CTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCATCAT 244473
|| |||||| ||||| | | ||| | || || | || | | | || | |
Sbjct 2892 CTGGAAGATGGCTTTGTTGAGGCGGCGCGACTCAGGGCTGCCAAACGCGTACCGCAGCCT 2833
Query 244474 CATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGA 244533
| || |||| ||||| ||||| || || | | | ||| ||||| ||| |||| ||
Sbjct 2832 GAAAAAAGCGTCTGCCAGGCCCTGGACACCAACTGCAACGGGCCTGTGCCGCGTGTTCGA 2773
Query 244534 GCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGT 244593
|| ||| || ||||| |||| ||||| |||||||||||||
Sbjct 2772 CACTCTGCACTCGTCCAGAGGGTACGCACCCACGTCTATCACGCGGTTGAGGTTGCGGAC 2713
Query 244594 GATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGAT 244653
| || | ||| || ||| ||| || | || | | ||| |||| | | |
Sbjct 2712 AAGCACTCTGACCACATCGTGAAGCTTGTGCAGGTTGAAAAAA-AGGCCTCCTTGCCCGT 2654
Query 244654 GGTGATCCTCACAAAC-TCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCT 244712
|| ||| |||||| ||| | |||| | | |||||||| || || | ||| |
Sbjct 2653 CGTCCTCC--ACAAACATCGGCAACC-CGACCGAGCCGAGGTTGCACACCGCGATCTCAT 2597
Query 244713 CCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGT 244772
|| | | ||||| ||| | |||| |||||| || ||||||| ||||| ||||
Sbjct 2596 CCTTGCACGAGTACTCGACCACCTCGCAGCAGAGATTCGACGACTTGATCGTGCCGAGGT 2537
Query 244773 GCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCT 244832
|| || ||| | || |||||||| || || ||||||||||| || || ||| ||||
Sbjct 2536 TCTTCTGGTTGCATTTCGCGTTGCACGCATCTTTGTAGAGCATAAACGGTGTCCCAGTCT 2477
Query 244833 CGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCT 244892
| ||| | | | | || | ||||| | | ||||| ||| ||| | |
Sbjct 2476 CCGTCTGCGAGTACACAATCCTCTCCCAGACCTTACGGGCCTTCACCTGCCTTAGGTACC 2417
Query 244893 TGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTC-GTCT 244951
||||||| |||||| | |||||| | ||||||||||| ||||| || | |
Sbjct 2416 GGCCCTCTTGCTCGTATTGCTCGTACAGAGACTCGAACTCGGCCCCCCATGTGTCCGACA 2357
Query 244952 AGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGC 245011
| ||||||| || || | | | ||||||||| | | | | || ||||| | ||
Sbjct 2356 ACCCCGGGGC-CGTGTCCTCGGAGAAAAGACTCCACACCTGGTCCTTCTCGACCCGCCGC 2298
Query 245012 ATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAG 245071
||||| | |||||| ||||| | || | ||| || |||| || || | ||| ||| |
Sbjct 2297 ATGAACAAGTCGGGAATCCACAATGCATAGAATAGATCCCGGGCCCGCATCTCCTCCTTG 2238
Query 245072 CCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAG 245131
|| ||| ||| ||| || | || || | || ||| | ||||| ||||||| ||
Sbjct 2237 CCGTGGTTTTTCTTCAAATCGAGGAATTCCATGATGTCTGCATGCCACGGCTCCAAATAC 2178
Query 245132 ACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCGC-GTT 245190
|| | || |||||||||||||| || |||||||||| ||| || || || |||
Sbjct 2177 GCACAAATCGCACCGGGCCGCTTGTTTCCGCCCTGGTCCA-CATACTTGGCAGTGCTGTT 2119
Query 245191 GAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTA 245247
||| | || || | || ||||||||| | || |||||||||||| |||||
Sbjct 2118 GAACACCCGGAGCATCGGAACTATGCCGCTGGATGTCCCGTTGGTGCCCGAAATGTA 2062
Score = 143 bits (158), Expect = 5e-29
Identities = 317/472 (67%), Gaps = 14/472 (3%)
Strand=Plus/Minus
Query 243741 TGAACTGGACGGG-TGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGT 243799
|||||| || || || || |||||||| |||||||| |||||||||||||||||| |
Sbjct 3618 TGAACTTGATGGCCTGGGA-GGCGGCCTGGGTCCTCAAGTAGTACATGCCGGTCTTCAAG 3560
Query 243800 CCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCG 243859
|| || |||||| | || ||||||| |||| ||| |||| | | |
Sbjct 3559 CCCTTGTGCCAGGCATAGAAGTGCATGCTGGTCATCTTGGC------GAGCGT---GCAG 3509
Query 243860 TCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCG 243919
|||| | || |||||||| | | ||| ||||| ||| |||| || || || ||
Sbjct 3508 TCCTTG---AGGAAGAGGTTCATGCTCTGTGATTGGTCAACGTAGGGAGCACGGTCGGCA 3452
Query 243920 GCCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGG 243979
|||||| |||| | |||||| || || || | | |||||||||| | |||
Sbjct 3451 GCCATGTCAATGATGATCTTCTGCGACATGTCCCAGACGGTCTTGTAGAGTTGTTTGGTA 3392
Query 243980 TGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGC 244039
|| || |||| || | |||| ||| | ||||| || | |||| | |||| |
Sbjct 3391 TGTTCCGGGATGCCGGCTATGTCCTGGATGGAGCCGTTTGCGGCGATAATCTGGTCCTTC 3332
Query 244040 ATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCACCACC 244099
|||| | ||||||||||||| || || || | ||||| || | | ||| || |||
Sbjct 3331 ATGTGTGCATTCCACAGGCCCAGACGGTCTAGATCATCGACGAGATACGAGTTGACTACC 3272
Query 244100 TGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTC 244159
|| ||| || || || || | ||| ||||| |||| ||| ||||||| || |
Sbjct 3271 TGGTGCTCGCCAGAGAGAACTCTTCGCGTGTAGATGTTGGAAGTGATGGGCTCGAAGCAC 3212
Query 244160 TCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCA 244211
|||||| ||||| ||||||| || || || |||||| | | |||||
Sbjct 3211 TCCGTGAACCCCAGGATCTGCGAGGTCGATGCCGTGGGCATGAGGGCCACCA 3160
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944327655453280
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