Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq14 257 2e-63 >seq14 Length=27313 Score = 257 bits (284), Expect = 2e-63 Identities = 1125/1757 (64%), Gaps = 45/1757 (3%) Strand=Plus/Plus Query 113558 TCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTC 113617 |||| | |||| || |||| | || ||||| || || | ||||||||| || ||| Sbjct 16359 TCAACGGTGAATTGGATGGCACGAGCAGCGGCCTGTGTACGCAAGTAGTACATACCTGTC 16418 Query 113618 TTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTT 113677 || | |||| ||||||| | || | ||||| || | |||||| | ||||| | Sbjct 16419 TTCAAACCCTTCTTCCAGCCGTAAAAGTGCATGGACGTCAACTTACCCATAGTTGGCGAT 16478 Query 113678 TCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATA 113737 | || | || |||||| ||| || || ||| || || | || || ||||| Sbjct 16479 TGCAAGTGGATGTTCATGGATTGAGACTGGCAAATGTAGGCACCTCTGTCGGCAGCCATG 16538 Query 113738 TCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCT 113797 || || ||| ||| | |||||| ||||| ||||| | |||||||| | ||| Sbjct 16539 TCGATGACAGATTTCTGAGAAAGTTCCCAAACAGTCCTGTACAATTTCTTAATGTTGTCT 16598 Query 113798 GGGATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCAT---A 113854 || |||| | || || ||||| ||| | | | |||| || |||||| | Sbjct 16599 GGAATATTAGGTAAGTTCTGAATGGATCCATTGTCATGAATGATGAAATTCTTCATTGCA 16658 Query 113855 TCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACA 113914 || || ||| | || || | | || ||| | | | |||||||| Sbjct 16659 TCGTT---CCATATTCCCATATCAATAAGGTCCCTTAGCATGTAAGGATTGACAATCTGG 16715 Query 113915 AACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCA 113974 |||||||| || || | |||| ||||||| || | ||| |||||||||||||||| Sbjct 16716 AACTCACCAGCAAGAACTCTTCTCTGATAGATGTTAGAGGTGAATGGCTCAAAGCACTCG 16775 Query 113975 TTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTA 114034 |||| ||||| || || | ||| ||||| || ||||| || || | | ||| || Sbjct 16776 TTGTAACCCATAATCTGAGAGGTAGAGGCAGTTGGCATAGGAGCGACCAAAAGCGAATTT 16835 Query 114035 CGGAGACCCTTTTCCCTAATGCGTTC-----CTTGAGGGCGTCCCAGTCGTA--GTTGAG 114087 | ||||| | ||| | ||| || ||| | | ||||| || | | | || Sbjct 16836 CTAAGACCAT----CCTTA-GCGATCTTGGCCTTCAAAGTCTCCCAATCCCACAGATCAG 16890 Query 114088 CTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTC 114147 ||| || | | ||||||||| ||||||| ||||| | ||| ||||| || || || Sbjct 16891 --TTGGCTTCTTATTCCACATATCGTACTGGAGAATACCCTTGGAAGCTGGAGAGCCTTC 16948 Query 114148 AAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCG--CCTCGAGGGCTGCG 114205 | |||||||| | ||||| || | | || | || | |||| || || | Sbjct 16949 GTAGGTCTCGTACGTACCCTCTTCCACAG--AAAGCTGATTTGATTCCTCCAGAGCACCA 17006 Query 114206 TGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCG 114265 || |||| ||||| || || | || | | || || | | ||||| | Sbjct 17007 TGGTACAAGGTCTCGAATATCTGTATGTTAAGCTCACGAGCTTCTGGGCAGTCAAATGGC 17066 Query 114266 AGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGT 114325 | || | || | || |||||| |||||||| ||||| || | || || | | | Sbjct 17067 AATCTGAGCATGAAGAACGTATCCGCAAGACCTTGAACACCAAGAGCGATAGGTCTGTTT 17126 Query 114326 CTCATATTAGACTTTCGAGCGGTCTCCA-CGGGATAAAAATTCCTATCGATAACCCTATT 114384 ||||| || || || || || ||| | | || || ||||||| || || || | || Sbjct 17127 CTCATGTTGGAGTTGCGGGCC-TCTGGAACTGGGTAGTAATTCCTGTCAATGACACGGTT 17185 Query 114385 TAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA---ACTGCG 114441 | || ||||||||||| ||||| | || | ||| || | | || || | | Sbjct 17186 CAAGTTACGTGTGACAACCTTGGTGATCTTGTGCAACTTCTCAAAGTTGAACCAACAGTG 17245 Query 114442 AGTCTCTTCA---TTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGT 114498 | || || | ||| | ||| | | || |||| ||||||||| | Sbjct 17246 ATCCTTGTCGGACTCAACAAATGCAGGCAAGCAAATGTTTGCCAAGTTACACACACCGAC 17305 Query 114499 CTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCC 114558 |||||| | || |||||| | || || |||||||| ||| ||| ||||| || Sbjct 17306 CTCATCTGGAGAAGAGTACTCGACAACCTCACAGCACAAATTCGAAGACTTGATGGTTCC 17365 Query 114559 CAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCC 114618 ||||||||||||||| |||| |||| || ||||||||||||| |||| | ||||| || Sbjct 17366 CAAGTTCTTTTGATTACTCTTTCTGTTGCAGGCATCCTTGTAAATCATGAAAGGCGTACC 17425 Query 114619 CGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA-GACATCGGCGGCTGGCACAGTGGCGT 114677 || || || || | || | ||| | ||| || || | | || || || Sbjct 17426 GGTTTCTGTCTGAGCCTCCAAAATCTGATACCACAACTTCTGAGCCT-TAACGGTTCTTC 17484 Query 114678 TGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCT 114737 | | || ||||||| |||||| ||||| | ||||||||| ||||| | | Sbjct 17485 TTCCACGTCCCTCCTTCTCGTAACGAGTGTACAACTTTTCAAACTCGTCACCATAAACAT 17544 Query 114738 CTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACAC 114797 |||| || ||||| |||| | || | || | || |||| | || | ||||||| Sbjct 17545 CTGAAAGACCTGGGGCCTCAGAAGGAGAAAACAAAGTCCATGTATCATTTTGTTCAACAC 17604 Query 114798 GCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCG-ACAGCGAGCTTCT 114856 |||||||||| || || |||||||| ||||||| ||| | ||| || || || | || Sbjct 17605 GCTTCATGAATAGATCAGGGATCCAAAGAGCTGGGAACAAATCACGTGCACGGATC-TCC 17663 Query 114857 TCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCC 114916 || | || ||||| | | || | ||||| | |||||| || ||||| ||||| Sbjct 17664 TCCTTACCGTGATTCTTCCTGATATCGATGAAGTCAAAGATATCTGCATGCCAAGGTTCT 17723 Query 114917 AGGTACACCGCGATTG-ACCCCTTACGACG--ACCAGCCTGGTTTACATACCTCGCTGTG 114973 | ||| | || || | ||| | | |||| | |||| |||||||| || || Sbjct 17724 AAGTAGATAGCAATGGCACCTGGTCTCTTGTTACCACCTTGGTCAACATACCTAGCAGTA 17783 Query 114974 GCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA-- 115031 || || || |||| ||| ||||| ||||||| ||| || || || || || Sbjct 17784 CTGTTGAACACACGAACCATAGGAATAATACCATTGGATGTACCGTTGGTACCAGCAATG 17843 Query 115032 TACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTG 115091 || || || | | | | | ||| || || | ||||||||| || ||| ||| | Sbjct 17844 TATGAACCT--GTAGAACGAATGTTATGAATATGTAGACCAATACCACCAGCCGTCTTGG 17901 Query 115092 AGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTG 115151 | || || |||| | | | || ||||||| || || || |||||| |||| ||| Sbjct 17902 AAATCAAGGCACACTGTTTCAAAGTGTCGTAGATACCTTCAATAGAGTCATCCTTCATTG 17961 Query 115152 CGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTG 115211 | | | |||||| |||||| ||||| | ||| ||||| || || || | ||||| | Sbjct 17962 CAACTAAGAAGCAAGACGACATCTGTGGGCGTGGAGTACCGGCATTAAACAATGTTGGAG 18021 Query 115212 TCGCGTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATG 115270 ||||| |||| || || | |||||| ||| || | |||||| || ||||| Sbjct 18022 AGGCGTGTGTGAA-GTATCTCTTCGACATCAAATCATACGACTCCAAAACTTTAGGAATA 18080 Query 115271 TCTTCCCCGTGAATACC 115287 || || |||||||| || Sbjct 18081 TCATCACCGTGAATTCC 18097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597346297352240