Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq187 123 2e-23 >seq187 Length=11729 Score = 123 bits (136), Expect = 2e-23 Identities = 420/645 (65%), Gaps = 26/645 (4%) Strand=Plus/Plus Query 94003 TGTGCGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCC 94062 ||||||| ||||| ||| |||||| |||||||| || || |||| || || Sbjct 1993 TGTGCGATGATCTCGAAAGCCGCGGGTGGAATCGGAATGCACCTCAGTAACGTTCGGGCG 2052 Query 94063 AGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGG 94122 || | ||||| || ||||| || || |||| |||| | || || ||||||||| Sbjct 2053 GCCGGAACGTACATTTCGGGCACCAACGGGACATCCAGCGGCATAGTTCCGATGCTCCGG 2112 Query 94123 GTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTC---T 94179 || ||||||| | | || || ||||||||||| || | | || ||| | | Sbjct 2113 GTGTTCAACAGCACTGCCAAGTATGTGGACCAGGGCGGAAACAAGCGGCCCGGTGCGATT 2172 Query 94180 TTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAG 94239 | ||| ||| | ||||| ||||| || ||| | || ||| |||| || || Sbjct 2173 TGTGCG---TATTTGGAGCCGTGGCATGCAGACATCATGGAATTCCTCGATTTGAAGAAA 2229 Query 94240 AACCACGGCAACGATCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCA 94296 ||||||||||| || ||||| ||||| | || || ||||| || | ||| | || Sbjct 2230 AACCACGGCAAGGA---GGAGATGCGGGCCCGGGATCTATTCTATGCATTGTGGATTCCC 2286 Query 94297 GACCTTTTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGA- 94355 ||| | || ||| || |||||||| || | ||||||||||| | || | || Sbjct 2287 GACTTGTTCATGCGGCGGGTCGAGAAGGACCAGGTGTGGAGTCTTTTCT---CCGAGGAC 2343 Query 94356 ATGTCCC--GGACTGTCCGACGTTTGTGGATCGCGTTTTGAAGACT-TGTATGCTCGTTA 94412 | | ||| || |||| ||| || || | || || || || |||| | | || Sbjct 2344 ACGGCCCCGGGGTTGTCGGACACATGGGGGGC-CGAGTTCGAGTCTCTGTACGAGCAATA 2402 Query 94413 CGAATCGCAGGGCAAGGCC---AGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGAT 94469 ||| ||||| | | ||| ||| || | || | ||| | ||||| ||| Sbjct 2403 CGAGCAAGAGGGCCGGTACCTAAGGCAGG---TGAAGGCCCGTAAGGTCTGGGAGAGGAT 2459 Query 94470 CGTGGACGTACAGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGC 94529 ||| || ||| |||||| || || || | || | | ||| || | |||||| Sbjct 2460 TGTGTACTCGCAGACGGAGACTGGGACACCGTTTATGCTCTACAAAGATGCGTGCAACGC 2519 Query 94530 CAAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGT 94589 || | ||||||| || ||||||| ||||||| |||||||| ||| |||| | || Sbjct 2520 GAAATGCAACCAGAAGAACCTCGGCACGATCAAGTCGTCGAATCTCTGCTGCGAGGTGGT 2579 Query 94590 CGAGTATACTTCTCCGGACGAGATTGCTGTGTGTAACCTGGGCTC 94634 |||||| | | ||| ||||| || ||||| ||||| ||||| Sbjct 2580 CGAGTACTCGTGCAAGGATGAGATCGCGGTGTGCAACCTCGGCTC 2624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494717152008880