Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq423 107 2e-18 seq208 102 8e-17 >seq423 Length=50725 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | |||||| || || | | |||||||| |||||||||||||| | Sbjct 3597 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGAC 3656 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | |||||| | || ||||| | | |||| | | ||| || || || || Sbjct 3657 AAAGTTCTGCCGTCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGGA 3716 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| |||||||| | |||| || | ||||||| ||||| || Sbjct 3717 ATTCCCTCCTTGTCTTGGATCTTTTGTTTGACATTG-TCAATAGTGTCGGAAGACTCAAC 3775 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || ||||| |||| ||| || || ||||| ||||| Sbjct 3776 CTCAAGGGTGATGGTCTTACCGGTCAAAGTCTTAACGAAAATTTGCAT 3823 >seq208 Length=10633 Score = 102 bits (112), Expect = 8e-17 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | ||| || || || | ||||||||||||| ||||||||||| | Sbjct 9452 CCTCCTCTCAATCTCAAGACCAAGTGAAGAGTTGACTCCTTTTGGATGTTGTAGTCAGAC 9511 Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| | || | ||||| | || ||||||| | |||| | | ||| || || || || Sbjct 9512 AAAGTTCTGCCA-TCCTCCAACTGCTTACCGGCAAAGATCAATCTCTGCTGATCAGGTGG 9570 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || || || ||| ||||| || | |||| || | |||||| | ||||||| Sbjct 9571 GATTCCCTCCTTATCCTGGATCTTTTGCTTGACATTG-TCAATGGTGTCTGAAGACTCCA 9629 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | || ||||| |||| || || || ||||| ||||| Sbjct 9630 CCTCCAAGGTGATAGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCAT 9678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496256333192160