Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq423 95.1 1e-14
seq208 91.5 1e-13
>seq423
Length=50725
Score = 95.1 bits (104), Expect = 1e-14
Identities = 114/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| ||||| || || || || | ||||||| ||||| || || ||||| || || ||
Sbjct 3669 TCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGGAATTCCCTCCTTG 3728
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| || |||||||||| || | |||||||||||||| || || || || |
Sbjct 3729 TCTTGGATCTTTTGTTTGACATTGTCAATAGTGTCGGAAGACTCAACCTCAAGGGTGATG 3788
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || ||||| | ||| || || |||||||||||
Sbjct 3789 GTCTTACCGGTCAAAGTCTTAACGAAAATTTGCAT 3823
>seq208
Length=10633
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | || || ||||| ||||||||||| || || || | ||| | |
Sbjct 9464 CTCAAGACCAAGTGAAGAGTTGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCA 9523
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| ||||| || || || || | ||||||| ||||| || || || || || || |||
Sbjct 9524 TCCTCCAACTGCTTACCGGCAAAGATCAATCTCTGCTGATCAGGTGGGATTCCCTCCTTA 9583
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
|| || || ||||| |||| || | |||||| |||||||| || || | || |
Sbjct 9584 TCCTGGATCTTTTGCTTGACATTGTCAATGGTGTCTGAAGACTCCACCTCCAAGGTGATA 9643
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || | || || || |||||||||||
Sbjct 9644 GTCTTACCCGTCAAGGTCTTAACGAAAATTTGCAT 9678
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451997674260880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |