Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq14 237 2e-57 >seq14 Length=27313 Score = 237 bits (262), Expect = 2e-57 Identities = 1120/1754 (64%), Gaps = 39/1754 (2%) Strand=Plus/Plus Query 115519 TCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTC 115578 |||| | |||| || |||| | || ||||| || || | ||||||||| || ||| Sbjct 16359 TCAACGGTGAATTGGATGGCACGAGCAGCGGCCTGTGTACGCAAGTAGTACATACCTGTC 16418 Query 115579 TTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTT 115638 || | |||| ||||||| | || | ||||| || | |||||| | ||||| | Sbjct 16419 TTCAAACCCTTCTTCCAGCCGTAAAAGTGCATGGACGTCAACTTACCCATAGTTGGCGAT 16478 Query 115639 TCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATA 115698 | || | || |||||| ||| || || ||| || || | || || ||||| Sbjct 16479 TGCAAGTGGATGTTCATGGATTGAGACTGGCAAATGTAGGCACCTCTGTCGGCAGCCATG 16538 Query 115699 TCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCT 115758 || || ||| ||| | |||||| ||||| ||||| | |||||||| | ||| Sbjct 16539 TCGATGACAGATTTCTGAGAAAGTTCCCAAACAGTCCTGTACAATTTCTTAATGTTGTCT 16598 Query 115759 GGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACC-ATGAGATCCTTCAT--- 115814 || |||| | || || || || ||| || | ||| |||| || |||||| Sbjct 16599 GGAATATTAGGTAAGTTCTGAATGGATCCAT-TGTCATGAATGATGAAATTCTTCATTGC 16657 Query 115815 ATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCTTATTGACAACAAC 115874 ||| || ||| | || || | | || ||| | | || |||||||| Sbjct 16658 ATCGTT---CCATATTCCCATATCAATAAGGTCCCTTAGCATGTAAGGATTGACAATCTG 16714 Query 115875 AAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTC 115934 |||||||| || || | |||| |||||||||| | ||| |||||||||||||||| Sbjct 16715 GAACTCACCAGCAAGAACTCTTCTCTGATAGATGTTAGAGGTGAATGGCTCAAAGCACTC 16774 Query 115935 ATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 115994 |||| ||||| || || | || ||||| || ||||| || || | | ||| || Sbjct 16775 GTTGTAACCCATAATCTGAGAGGTAGAGGCAGTTGGCATAGGAGCGACCAAAAGCGAATT 16834 Query 115995 GCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTA--GTTGAGCTTT 116052 | ||||| || || |||| | | ||||| || | | | || || Sbjct 16835 TCTAAGACCATCCTTAGCGATCTTGGCCTTCAAAGTCTCCCAATCCCACAGATCAG--TT 16892 Query 116053 GTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAAT 116112 | || | | ||||||||| ||||||| ||||| | ||| ||||| || || || | Sbjct 16893 GGCTTCTTATTCCACATATCGTACTGGAGAATACCCTTGGAAGCTGGAGAGCCTTCGTAG 16952 Query 116113 GTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCG--CCTCGAGGGCTGCGTGAT 116170 ||||| || | ||||| || | | || | || | |||| || || | || | Sbjct 16953 GTCTCGTACGTACCCTCTTCCACAG--AAAGCTGATTTGATTCCTCCAGAGCACCATGGT 17010 Query 116171 ACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGAC 116230 ||| ||||| || || | || | | || || | | ||||| | | | Sbjct 17011 ACAAGGTCTCGAATATCTGTATGTTAAGCTCACGAGCTTCTGGGCAGTCAAATGGCAATC 17070 Query 116231 GGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCA 116290 | || | || |||||| |||||||| ||||| || | || || | | ||||| Sbjct 17071 TGAGCATGAAGAACGTATCCGCAAGACCTTGAACACCAAGAGCGATAGGTCTGTTTCTCA 17130 Query 116291 TATTAGACTTTCGAGCGGTCTCCA-CGGGATAAAAATTCCTATCGATAACCCTATTTAGA 116349 | || || || || || ||| | | || || ||||||| || || || | || | Sbjct 17131 TGTTGGAGTTGCGGGCC-TCTGGAACTGGGTAGTAATTCCTGTCAATGACACGGTTCAAG 17189 Query 116350 TTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA---ACTGCGAGTC 116406 || ||||||||||| ||||| | || | ||| || | | || || | || | Sbjct 17190 TTACGTGTGACAACCTTGGTGATCTTGTGCAACTTCTCAAAGTTGAACCAACAGTGATCC 17249 Query 116407 TCTTCA---TTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCA 116463 | || | ||| | ||| | | || |||| ||||||||| | |||| Sbjct 17250 TTGTCGGACTCAACAAATGCAGGCAAGCAAATGTTTGCCAAGTTACACACACCGACCTCA 17309 Query 116464 TCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAG 116523 || | || |||||| | || || |||||||| ||| ||| ||||| |||||| Sbjct 17310 TCTGGAGAAGAGTACTCGACAACCTCACAGCACAAATTCGAAGACTTGATGGTTCCCAAG 17369 Query 116524 TTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTC 116583 ||||||||||| |||| |||| || ||||||||||| | ||| | ||||| || || Sbjct 17370 TTCTTTTGATTACTCTTTCTGTTGCAGGCATCCTTGTAAATCATGAAAGGCGTACCGGTT 17429 Query 116584 TCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGC 116642 || || || | || | ||| | ||| | | || | | || || || | | Sbjct 17430 TCTGTCTGAGCCTCCAAAATCTGATACCACAACTTCTGAGCCTTA-ACGGTTCTTCTTCC 17488 Query 116643 TCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGA 116702 || ||||||| |||||| ||||| | |||||||| ||||| | | ||||| Sbjct 17489 ACGTCCCTCCTTCTCGTAACGAGTGTACAACTTTTCAAACTCGTCACCATAAACATCTGA 17548 Query 116703 GAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTT 116762 || ||||| |||| | ||| | || | || |||| | || | ||||| ||||| Sbjct 17549 AAGACCTGGGGCCTCAGAAGGAGAAAACAAAGTCCATGTATCATTTTGTTCAACACGCTT 17608 Query 116763 CATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCG-ACAGCGAGCTTCTTCAT 116821 |||||| || || |||||||| || || | ||| | ||| || || || | || || | Sbjct 17609 CATGAATAGATCAGGGATCCAAAGAGCTGGGAACAAATCACGTGCACGGATC-TCCTCCT 17667 Query 116822 CCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGT 116881 || ||||| | | || | ||||| | |||||| || ||||| ||||| | || Sbjct 17668 TACCGTGATTCTTCCTGATATCGATGAAGTCAAAGATATCTGCATGCCAAGGTTCTAAGT 17727 Query 116882 ACACCGCGATTGACCCCTTGCGAC----GACCAGCCTGGTTTACATACCTCGCCGTTGCG 116937 | | || | || | ||| | | |||| | |||| |||||||| || || | Sbjct 17728 AGATAGC-AATGGCACCTGGTCTCTTGTTACCACCTTGGTCAACATACCTAGCAGTACTG 17786 Query 116938 TTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TAC 116995 || || || |||| ||| ||||| ||||||| ||| || || || || || || Sbjct 17787 TTGAACACACGAACCATAGGAATAATACCATTGGATGTACCGTTGGTACCAGCAATGTAT 17846 Query 116996 GAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGA 117055 || || || | | | | | || || || | ||||||||| || ||| ||| || | Sbjct 17847 GA-ACCTG-TAGAACGAATGTTATGAATATGTAGACCAATACCACCAGCCGTCTTGGAAA 17904 Query 117056 TTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGA 117115 | || |||| | | | || ||||||| || || || |||||| |||| |||| | Sbjct 17905 TCAAGGCACACTGTTTCAAAGTGTCGTAGATACCTTCAATAGAGTCATCCTTCATTGCAA 17964 Query 117116 TGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCG 117175 | |||||| |||||| ||||| | ||| ||||| || || || | ||||| | | Sbjct 17965 CTAAGAAGCAAGACGACATCTGTGGGCGTGGAGTACCGGCATTAAACAATGTTGGAGAGG 18024 Query 117176 CGTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCT 117234 |||| |||| || || | |||||| ||| || | |||||| || ||||| || Sbjct 18025 CGTGTGTGAA-GTATCTCTTCGACATCAAATCATACGACTCCAAAACTTTAGGAATATCA 18083 Query 117235 TCCCCGTGAATACC 117248 || |||||||| || Sbjct 18084 TCACCGTGAATTCC 18097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613499699874480