Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq14 237 2e-57
>seq14
Length=27313
Score = 237 bits (262), Expect = 2e-57
Identities = 1120/1754 (64%), Gaps = 39/1754 (2%)
Strand=Plus/Plus
Query 115519 TCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTC 115578
|||| | |||| || |||| | || ||||| || || | ||||||||| || |||
Sbjct 16359 TCAACGGTGAATTGGATGGCACGAGCAGCGGCCTGTGTACGCAAGTAGTACATACCTGTC 16418
Query 115579 TTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTT 115638
|| | |||| ||||||| | || | ||||| || | |||||| | ||||| |
Sbjct 16419 TTCAAACCCTTCTTCCAGCCGTAAAAGTGCATGGACGTCAACTTACCCATAGTTGGCGAT 16478
Query 115639 TCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATA 115698
| || | || |||||| ||| || || ||| || || | || || |||||
Sbjct 16479 TGCAAGTGGATGTTCATGGATTGAGACTGGCAAATGTAGGCACCTCTGTCGGCAGCCATG 16538
Query 115699 TCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCT 115758
|| || ||| ||| | |||||| ||||| ||||| | |||||||| | |||
Sbjct 16539 TCGATGACAGATTTCTGAGAAAGTTCCCAAACAGTCCTGTACAATTTCTTAATGTTGTCT 16598
Query 115759 GGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACC-ATGAGATCCTTCAT--- 115814
|| |||| | || || || || ||| || | ||| |||| || ||||||
Sbjct 16599 GGAATATTAGGTAAGTTCTGAATGGATCCAT-TGTCATGAATGATGAAATTCTTCATTGC 16657
Query 115815 ATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCTTATTGACAACAAC 115874
||| || ||| | || || | | || ||| | | || ||||||||
Sbjct 16658 ATCGTT---CCATATTCCCATATCAATAAGGTCCCTTAGCATGTAAGGATTGACAATCTG 16714
Query 115875 AAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTC 115934
|||||||| || || | |||| |||||||||| | ||| ||||||||||||||||
Sbjct 16715 GAACTCACCAGCAAGAACTCTTCTCTGATAGATGTTAGAGGTGAATGGCTCAAAGCACTC 16774
Query 115935 ATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 115994
|||| ||||| || || | || ||||| || ||||| || || | | ||| ||
Sbjct 16775 GTTGTAACCCATAATCTGAGAGGTAGAGGCAGTTGGCATAGGAGCGACCAAAAGCGAATT 16834
Query 115995 GCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTA--GTTGAGCTTT 116052
| ||||| || || |||| | | ||||| || | | | || ||
Sbjct 16835 TCTAAGACCATCCTTAGCGATCTTGGCCTTCAAAGTCTCCCAATCCCACAGATCAG--TT 16892
Query 116053 GTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAAT 116112
| || | | ||||||||| ||||||| ||||| | ||| ||||| || || || |
Sbjct 16893 GGCTTCTTATTCCACATATCGTACTGGAGAATACCCTTGGAAGCTGGAGAGCCTTCGTAG 16952
Query 116113 GTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCG--CCTCGAGGGCTGCGTGAT 116170
||||| || | ||||| || | | || | || | |||| || || | || |
Sbjct 16953 GTCTCGTACGTACCCTCTTCCACAG--AAAGCTGATTTGATTCCTCCAGAGCACCATGGT 17010
Query 116171 ACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGAC 116230
||| ||||| || || | || | | || || | | ||||| | | |
Sbjct 17011 ACAAGGTCTCGAATATCTGTATGTTAAGCTCACGAGCTTCTGGGCAGTCAAATGGCAATC 17070
Query 116231 GGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCA 116290
| || | || |||||| |||||||| ||||| || | || || | | |||||
Sbjct 17071 TGAGCATGAAGAACGTATCCGCAAGACCTTGAACACCAAGAGCGATAGGTCTGTTTCTCA 17130
Query 116291 TATTAGACTTTCGAGCGGTCTCCA-CGGGATAAAAATTCCTATCGATAACCCTATTTAGA 116349
| || || || || || ||| | | || || ||||||| || || || | || |
Sbjct 17131 TGTTGGAGTTGCGGGCC-TCTGGAACTGGGTAGTAATTCCTGTCAATGACACGGTTCAAG 17189
Query 116350 TTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA---ACTGCGAGTC 116406
|| ||||||||||| ||||| | || | ||| || | | || || | || |
Sbjct 17190 TTACGTGTGACAACCTTGGTGATCTTGTGCAACTTCTCAAAGTTGAACCAACAGTGATCC 17249
Query 116407 TCTTCA---TTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCA 116463
| || | ||| | ||| | | || |||| ||||||||| | ||||
Sbjct 17250 TTGTCGGACTCAACAAATGCAGGCAAGCAAATGTTTGCCAAGTTACACACACCGACCTCA 17309
Query 116464 TCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAG 116523
|| | || |||||| | || || |||||||| ||| ||| ||||| ||||||
Sbjct 17310 TCTGGAGAAGAGTACTCGACAACCTCACAGCACAAATTCGAAGACTTGATGGTTCCCAAG 17369
Query 116524 TTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTC 116583
||||||||||| |||| |||| || ||||||||||| | ||| | ||||| || ||
Sbjct 17370 TTCTTTTGATTACTCTTTCTGTTGCAGGCATCCTTGTAAATCATGAAAGGCGTACCGGTT 17429
Query 116584 TCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGC 116642
|| || || | || | ||| | ||| | | || | | || || || | |
Sbjct 17430 TCTGTCTGAGCCTCCAAAATCTGATACCACAACTTCTGAGCCTTA-ACGGTTCTTCTTCC 17488
Query 116643 TCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGA 116702
|| ||||||| |||||| ||||| | |||||||| ||||| | | |||||
Sbjct 17489 ACGTCCCTCCTTCTCGTAACGAGTGTACAACTTTTCAAACTCGTCACCATAAACATCTGA 17548
Query 116703 GAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTT 116762
|| ||||| |||| | ||| | || | || |||| | || | ||||| |||||
Sbjct 17549 AAGACCTGGGGCCTCAGAAGGAGAAAACAAAGTCCATGTATCATTTTGTTCAACACGCTT 17608
Query 116763 CATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCG-ACAGCGAGCTTCTTCAT 116821
|||||| || || |||||||| || || | ||| | ||| || || || | || || |
Sbjct 17609 CATGAATAGATCAGGGATCCAAAGAGCTGGGAACAAATCACGTGCACGGATC-TCCTCCT 17667
Query 116822 CCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGT 116881
|| ||||| | | || | ||||| | |||||| || ||||| ||||| | ||
Sbjct 17668 TACCGTGATTCTTCCTGATATCGATGAAGTCAAAGATATCTGCATGCCAAGGTTCTAAGT 17727
Query 116882 ACACCGCGATTGACCCCTTGCGAC----GACCAGCCTGGTTTACATACCTCGCCGTTGCG 116937
| | || | || | ||| | | |||| | |||| |||||||| || || |
Sbjct 17728 AGATAGC-AATGGCACCTGGTCTCTTGTTACCACCTTGGTCAACATACCTAGCAGTACTG 17786
Query 116938 TTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TAC 116995
|| || || |||| ||| ||||| ||||||| ||| || || || || || ||
Sbjct 17787 TTGAACACACGAACCATAGGAATAATACCATTGGATGTACCGTTGGTACCAGCAATGTAT 17846
Query 116996 GAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGA 117055
|| || || | | | | | || || || | ||||||||| || ||| ||| || |
Sbjct 17847 GA-ACCTG-TAGAACGAATGTTATGAATATGTAGACCAATACCACCAGCCGTCTTGGAAA 17904
Query 117056 TTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGA 117115
| || |||| | | | || ||||||| || || || |||||| |||| |||| |
Sbjct 17905 TCAAGGCACACTGTTTCAAAGTGTCGTAGATACCTTCAATAGAGTCATCCTTCATTGCAA 17964
Query 117116 TGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCG 117175
| |||||| |||||| ||||| | ||| ||||| || || || | ||||| | |
Sbjct 17965 CTAAGAAGCAAGACGACATCTGTGGGCGTGGAGTACCGGCATTAAACAATGTTGGAGAGG 18024
Query 117176 CGTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCT 117234
|||| |||| || || | |||||| ||| || | |||||| || ||||| ||
Sbjct 18025 CGTGTGTGAA-GTATCTCTTCGACATCAAATCATACGACTCCAAAACTTTAGGAATATCA 18083
Query 117235 TCCCCGTGAATACC 117248
|| |||||||| ||
Sbjct 18084 TCACCGTGAATTCC 18097
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613499699874480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |