Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq208 159 8e-34
seq423 114 3e-20
>seq208
Length=10633
Score = 159 bits (176), Expect = 8e-34
Identities = 169/222 (76%), Gaps = 3/222 (1%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| ||| | ||| ||||| ||||||||||||| ||||||||||| |||||| || ||
Sbjct 9463 TCTCAAGACCAAGTGAAGAGTTGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCC 9522
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||| |||| |||||| ||||| ||||| | | |||||| || || ||||| ||
Sbjct 9523 ATCCTCCAACTGCTTACCGGCAAAGATCAATCTCTGCTGATCAGGTGGGATTCCCTCCTT 9582
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
||||| ||||||||||| || || | |||||||| | || || ||||| |||||
Sbjct 9583 ATCCTGGATCTTTTGCTTGACATTGTCAATGGTGTCTGAAGACTCCACCTCCAAGGTGAT 9642
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635
||||||||||| | || || || |||||||| ||||||
Sbjct 9643 AGTCTTACCCGTCAAGGTCTTAACGAAAATTTG---CATTTT 9681
Score = 89.7 bits (98), Expect = 1e-12
Identities = 72/87 (83%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997
||||| ||||| ||||||||||| ||||| || |||||| | || |||||| |||| ||
Sbjct 9549 ATCTTTGCCGGTAAGCAGTTGGAGGATGGCAGAACTTTGTCTGACTACAACATCCAAAAG 9490
Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGA 201024
||||| ||||||||| | || ||||||
Sbjct 9489 GAGTCAACTCTTCACTTGGTCTTGAGA 9463
>seq423
Length=50725
Score = 114 bits (126), Expect = 3e-20
Identities = 159/222 (72%), Gaps = 3/222 (1%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| || | ||| ||||| |||||||| || | ||||||||||| |||||| || ||
Sbjct 3608 TCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGACAAAGTTCTGCC 3667
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|| |||| |||||| || || ||||| | | |||||| || || |||||| ||
Sbjct 3668 GTCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGGAATTCCCTCCTT 3727
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| || |||||||| || || || | ||||| | | || || || | |||||
Sbjct 3728 GTCTTGGATCTTTTGTTTGACATTGTCAATAGTGTCGGAAGACTCAACCTCAAGGGTGAT 3787
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635
|||||||| || | ||| || || |||||||| ||||||
Sbjct 3788 GGTCTTACCGGTCAAAGTCTTAACGAAAATTTG---CATTTT 3826
Score = 86.0 bits (94), Expect = 1e-11
Identities = 71/87 (82%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997
||||| || || ||||||||||| || || || |||||| | || |||||| | |||||
Sbjct 3694 ATCTTTGCTGGTAAGCAGTTGGAGGACGGCAGAACTTTGTCTGACTACAACATTCAGAAG 3635
Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGA 201024
||||| ||||||||| | |||||||||
Sbjct 3634 GAGTCCACTCTTCACTTGGTTTTGAGA 3608
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178906827375526
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |