Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq66 206 1e-47
seq423 143 1e-28
seq208 132 2e-25
seq675 123 1e-22
seq223 98.7 4e-15
seq334 86.0 2e-11
>seq66
Length=19490
Score = 206 bits (228), Expect = 1e-47
Identities = 848/1315 (64%), Gaps = 38/1315 (3%)
Strand=Plus/Plus
Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252
|||||||| | ||||| || | || || ||||| || || || | || ||||||
Sbjct 4062 GGAAAGCCAAAGATTCAGGTGGAGTACAAGGGTGAGACGAAGGTGTTCACACCAGAAGAA 4121
Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312
||||| || |||||| | ||||| |||| | ||||| || ||| | ||
Sbjct 4122 ATTTCTTCCATGGTTTTGACTAAGATGAGAACTACAGCCGAGGCTTATTTGGGAGAGAAG 4181
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
|| | ||||| || |||| ||||| ||||||||||| ||| | || | || ||||||
Sbjct 4182 GTGAAGGATGCCGTGGTTACCGTTCCTGCTTATTTCAACGATTCGCAGAGACAGGCAACT 4241
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432
|||||||| || ||||| ||||| || || | |||||||||| || ||||| ||
Sbjct 4242 AAAGATGCTGGTACCATTGCCGGTTTGAACGTGATGAGAATTATTAACGAGCCTACCGCT 4301
Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCA-AAAGAAACAGAAGaaaaaaaTATTTTAGT 451491
|| ||| | || ||||| | | | || | || | || | || || ||| | || |
Sbjct 4302 GCAGCTATTGCTTATGG-TTTGAATAAGGAGAAGGGAAGCGGTGAGAAGAATGTGTTGAT 4360
Query 451492 ATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATT 451551
|| ||||| ||||| || ||| ||| |||| | | || || || || || ||||
Sbjct 4361 CTTCGATTTGGGTGGTGGTACTTTCGATGTTTCTCTTTTGTCCATCGATGAGGGTATATT 4420
Query 451552 TGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCA-A 451610
||| || ||||| || |||||||| ||| |||| ||||| || ||||||| || |
Sbjct 4421 TGAGGTCAAGGCCACTGCAGGTGATACCCATTTAGGTGGTGAGGACTTTGATAA--CAGA 4478
Query 451611 TTGTGGAAT--GGTTGAAAACTGATGTTCAACGAAA--ACTAAAAGTAGATATTTCTACT 451666
||| | | ||| || ||| || | |||| || | ||| || || ||
Sbjct 4479 TTGGTTACTCACTTTGCTAA-TGAATTTAAGAGAAAGTACCACAAG--GACATGACTGGC 4535
Query 451667 AACCAAAAAGCACTTAGACGTCTTAAAACATCAGCAGAAAAAGCTAAAATTACACTCAGT 451726
||||| | |||| | ||| | | | ||| || || | ||| || | ||| | |
Sbjct 4536 AACCAGAGAGCATTGAGAAGATTAAGAACCGCATGCGAGAGAGCCAAGAGAACATTATCT 4595
Query 451727 ---TCAACACAAACTACTAGTATAAACATTGATAGTTTAGTTGATGGAATGGA-TTATGC 451782
||| ||||||| | | | ||||| ||| || || || || || | |
Sbjct 4596 TCCTCAGCACAAACATC---CGTTGAGATTGACTCTTTGTACGAGGGTATTGACTTCTAC 4652
Query 451783 TACTACTCTTACCCGTGCTAAATTTGAATCAATTTGTTCCAGTATTTTTGCACGGGTA-- 451840
|| | |||| | || | |||||| | |||| | ||| || | | || |
Sbjct 4653 -ACATCAATTACGAGAGCAAGATTTGAGGAACTTTGCT-CAG-ATCTGTTCAGATCCACT 4709
Query 451841 ATGAAACCTGTTGATCAAGTATTACATGATTCTAAAATTAGTAAAGATAAAATTGATGAA 451900
|| | || || || |||| || ||||| || || || | | |||| |||||
Sbjct 4710 CTGGACCCCGTCGAAAAAGTTTTGAGAGATTCAAAGCTTGACAAGGCTCAAATAGATGAG 4769
Query 451901 ATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCTTCTTAT 451960
||||||||||| || ||||| ||| ||||||| || || || | || | || |||
Sbjct 4770 ATTGTGCTTGTCGGTGGTTCCACAAGAATTCCAAAGATCCAGAAGTTGGTTTCCGATTAC 4829
Query 451961 TTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGCT 452020
|| || || | | | ||| | | || |||||||| ||||||||||| ||||||
Sbjct 4830 TTCAACGGCAAGGAGCCAAACAAGTCCATCAACCCTGATGAGGCTGTTGCATACGGTGCT 4889
Query 452021 GCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGA----TGAAA-AATTAGGAGATATTC 452075
|||||||| || || ||| | || ||| ||||| | ||| | | |||| | |
Sbjct 4890 GCAGTTCAGGCTGCCATTTTGACTGGT---GATGAATCGTCAAAGACTCAGGACTTGT-- 4944
Query 452076 TGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTA 452135
|| | | ||||| ||||| |||| | || |||| || || ||||| ||||||| |
Sbjct 4945 TGCTTTTGGATGTTACACCATTATCGTTGGGTATTGAGACCGCCGGTGGTGTGATGACAA 5004
Query 452136 ATTTAATTAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTACAGCAA 452195
| || ||| | || || | |||||||| || | |||| | || | | || | |
Sbjct 5005 AGTTGATTCCAAGAAACTCTACAATTCCTTGCAAGA--AGTCGGAGATCTTCTCCACCTA 5062
Query 452196 --GTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACG 452253
||||||||| |||||||| ||||| |||| || || || | | | ||
Sbjct 5063 TGCTGATAACCAGCCAGGTGTTTTGATTCAGGTGTACGAGGGTGAGAGAACCAGAACCAA 5122
Query 452254 AGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGGGGAAC 452313
|| || || |||| | ||| | | ||||| ||| ||||| ||
Sbjct 5123 GGACAACAACTTGTTAGGTAAGTTTGAGTTGACTGGAATTCCACCTGCACCAAGAGGTGT 5182
Query 452314 TCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGT 452373
||| || ||||| |||||| |||| | || ||||| ||||| | ||||| ||||||
Sbjct 5183 TCCCCAGATTGAGGTTACCTTTGATATCGACGCAAACGGTATCTTGAATGTTTCTGCAGT 5242
Query 452374 TGAAAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAAAAACCGTTTATC 452433
||| || | || || || | || || || ||||| ||||| || | | || ||
Sbjct 5243 TGAGAAGGGTACCGGTAAGTCCCAGAAGATCACCATTACGAATGACAAGGGCAGATTGTC 5302
Query 452434 TAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGAT 452488
|| || || ||||| || ||||| ||| || || || ||||||| ||| |||
Sbjct 5303 AAAGGAGGAGATTGACAAGATGGTCTCTGAGGCTGAGAAGTTCAAGGCTGAGGAT 5357
>seq423
Length=50725
Score = 143 bits (158), Expect = 1e-28
Identities = 174/237 (73%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 391037 ATATTATATTATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGA 391096
|||| ||| | |||| | ||||||||||| || |||| ||||| || || || |||||
Sbjct 3836 ATATCTTATCAAAATGCAAATTTTCGTTAAGACTTTGACCGGTAAGACCATCACCCTTGA 3777
Query 391097 TGTTGAATCATCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAAT 391156
||||| || || || | ||||| | | |||||||| || ||||| ||||| |||||
Sbjct 3776 GGTTGAGTCTTCCGACACTATTGACAATGTCAAACAAAAGATCCAAGACAAGGAGGGAAT 3717
Query 391157 TCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTT 391216
||| |||||||| || | || || || | || || || | || || || ||||||||
Sbjct 3716 TCCACCTGATCAGCAGAGATTGATCTTTGCTGGTAAGCAGTTGGAGGACGGCAGAACTTT 3657
Query 391217 GGCGGATTATAATATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273
| | || || || ||| | ||||| | || |||||||| || || ||| |||||||
Sbjct 3656 GTCTGACTACAACATTCAGAAGGAGTCCACTCTTCACTTGGTTTTGAGATTGAGAGG 3600
>seq208
Length=10633
Score = 132 bits (146), Expect = 2e-25
Identities = 165/226 (73%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | ||||||||||| || |||| ||||| ||||| || | || || || || ||
Sbjct 9679 AATGCAAATTTTCGTTAAGACCTTGACGGGTAAGACTATCACCTTGGAGGTGGAGTCTTC 9620
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
|| | |||||| | | || ||||| || || |||||||| ||||| || ||||||||
Sbjct 9619 AGACACCATTGACAATGTCAAGCAAAAGATCCAGGATAAGGAGGGAATCCCACCTGATCA 9560
Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228
|| | || || || | || || || | || ||||| ||||||||| | || || ||
Sbjct 9559 GCAGAGATTGATCTTTGCCGGTAAGCAGTTGGAGGATGGCAGAACTTTGTCTGACTACAA 9500
Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274
|| | ||||| |||| |||||||| || || ||| ||||||||
Sbjct 9499 CATCCAAAAGGAGTCAACTCTTCACTTGGTCTTGAGATTGAGAGGA 9454
>seq675
Length=37359
Score = 123 bits (136), Expect = 1e-22
Identities = 205/292 (70%), Gaps = 8/292 (3%)
Strand=Plus/Minus
Query 451312 AGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAAC 451371
||| || |||| || ||||||| || || |||||||||||||| ||| | || || ||
Sbjct 23087 AGTCACCCATGCGGTCGTTACTGTCCCTGCATATTTCAATGATGCTCAAAGACAGGCCAC 23028
Query 451372 TAAAGATGCAGG-ACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAG 451430
|||||||| || ||| ||||| || || |||||||| ||||| | || || ||||| |
Sbjct 23027 CAAAGATGCCGGTACA-ATTGCAGGCTTGAATGTTCTCAGAATTGTGAACGAGCCTACCG 22969
Query 451431 CAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAG 451490
| |||||| | || ||||| | ||| || | ||||| ||| | || | |
Sbjct 22968 CTGCTGCTATTGCTTATGG-TTTGGA-----TAAGGGTGATGAAGAGAAACAGATCATTG 22915
Query 451491 TATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTAT 451550
| | || || |||||||||||| |||| |||| | || || |||| | ||| | |
Sbjct 22914 TTTACGACTTGGGTGGAGGAACTTTTGATGTTTCTCTTCTGTCGATTGCCGGTGGAGCCT 22855
Query 451551 TTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGA 451602
||||||| ||| || ||||||||||| | || ||||| || ||||
Sbjct 22854 TTGAAGTTTTGGCCACTGCAGGTGATACTCACTTGGGTGGTGAGGACTTTGA 22803
>seq223
Length=129710
Score = 98.7 bits (108), Expect = 4e-15
Identities = 196/290 (68%), Gaps = 19/290 (7%)
Strand=Plus/Minus
Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381
|| || || || ||||| |||||||| || ||| | ||| | || ||||||||| |||
Sbjct 87602 GCTGTGATAACAGTTCCAGCTTATTTTAACGATTCTCAAAGACAGGCAACTAAAACTGCG 87543
Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441
|| | | | |||||||||||| | ||||| | |||||||||||||| || | ||
Sbjct 87542 GGCGAGTTGGTTGGTTTAAATGTCGTGAGAATTGTGAATGAACCTACAGCTGCATCACTT 87483
Query 451442 GCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaa----aaTATTTTAGTATTTGA 451497
|| ||||| || || ||||| || || | | ||| | ||
Sbjct 87482 GCCTATGGTCT-------------TAACCAGAATAAGAATGGCACGGTCGCAGTGTACGA 87436
Query 451498 TTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCA-ATTGAAGATGGGGTATTTGAAG 451556
||| ||||| || ||| ||||| || | ||| | || || ||||| || ||||| |
Sbjct 87435 TTTGGGTGGTGGTACTTTTGATATCTC-GATCTTGGATATAGATGATGGTGTTTTTGAGG 87377
Query 451557 TAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAAT 451606
| | |||||||||| ||||| ||| ||||||| || ||| | || |||
Sbjct 87376 TGAGATCAACCAATGGGGATACACATTTAGGAGGCGAGGATTTCGACAAT 87327
>seq334
Length=126124
Score = 86.0 bits (94), Expect = 2e-11
Identities = 113/152 (74%), Gaps = 6/152 (4%)
Strand=Plus/Plus
Query 420808 GTAAATACAACAGTTTTTGTAGGCATATTTACACCAACAGAAAAAGTTTCAGTTGCTAAC 420867
||||| || |||||||| | ||||||||||| |||| |||||| || || || || ||
Sbjct 85414 GTAAACACGACAGTTTTAGCAGGCATATTTAATCCAATAGAAAAGGTCTCTGTAGCAAAA 85473
Query 420868 AAAACTTTAATTAAt--ttttttGAATAAAGAATTTCAACAATTTCTTTTAAAATAGGAA 420925
| || || | ||| || || |||||| |||||| | ||||| || || || || |
Sbjct 85474 AGTACCTTCAAGAATCCTTCTTGGAATAA--AATTTCTATGATTTCCTTCAATATTGGTA 85531
Query 420926 TTATACCAGAATGATGATATGCC-ACACCTCT 420956
| ||||||||||||| ||||| | ||||||
Sbjct 85532 GCAAACCAGAATGATGA-ATGCCTATACCTCT 85562
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975693643013624
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |