Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq14 273 3e-68 >seq14 Length=27313 Score = 273 bits (302), Expect = 3e-68 Identities = 1114/1721 (65%), Gaps = 61/1721 (4%) Strand=Plus/Minus Query 111642 GGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACATACGACAAGATGTCCC-GTGG 111700 || || || || || |||||| | ||||||||| | || || |||||| | | Sbjct 18097 GGAATTCACGGTGATGATATTCCTAAAGTTTTGGAGTCGTATGATTTGATGTCGAAGAGA 18038 Query 111701 TATGTTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTC 111760 || |||| ||||| | ||||| | || || || ||||| ||| | || || ||||| Sbjct 18037 TAC-TTCACACACGCCTCTCCAACATTGTTTAATGCCGGTACTCCACGCCCACAGATGTC 17979 Query 111761 CAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCAC 111820 ||| ||| | |||||| ||||| || || || | || || |||| |||| | | Sbjct 17978 GTCTTGCTTCTTAGTTGCAATGAAGGATGACTCTATTGAAGGTATCTACGACACTTTGAA 17919 Query 111821 TGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAG 111880 | |||||| || || ||| |||||||||||| || | || || ||| | | | Sbjct 17918 ACAGTGTGCCTTGATTTCCAAGACGGCTGGTGGTATTGGTCTACATATTCATAACATTCG 17859 Query 111881 AGCCAACAAGTCTCGT--ATTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATG 111938 | ||| || || | ||| ||||| || ||| ||| ||||||||||||| ||| Sbjct 17858 -TTCTACAGGT-TCATACATTGCTGGTACCAACGGTACATCCAATGGTATTATTCCTATG 17801 Query 111939 CTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGTCGCAAG------ 111992 |||| || || ||| || || | ||||| |||||| || || |||| Sbjct 17800 GTTCGTGTGTTCAACAGTACTGCTAGGTATGTTGACCAAGGTG---GTAACAAGAGACCA 17744 Query 111993 GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTG 112052 || | || || |||| | || || ||||| || |||||| | || ||| | || | Sbjct 17743 GGTGCCATTGCTATCTACTTAGAACCTTGGCATGCAGATATCTTTGACTTCATCGATATC 17684 Query 112053 CGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGAT 112111 | || || ||| | ||||| | | |||| || ||| | ||| | ||||| ||||| Sbjct 17683 AGGAAGAATCACGGTAAGGAGGA-GATCCGTGCACGTGATTTGTTCCCAGCTCTTTGGAT 17625 Query 112112 TCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGA 112171 || ||||| ||||||||| | ||||| | | || | ||| || | |||| ||| Sbjct 17624 CCCTGATCTATTCATGAAGCGTGTTGAACAAAATGATACATGGACTTTGTTTTCTCCTTC 17565 Query 112172 CAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTA 112231 |||| || ||||| || |||| ||||| ||||||||| | ||||| || Sbjct 17564 TGAGGCCCCAGGTCTTTCAGATGTTTATGGTGACGAGTTTGAAAAGTTGTACACTCGTTA 17505 Query 112232 CGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTC 112290 |||| | || | || | | || || ||| | || | ||||| | ||| Sbjct 17504 CGAGAAGGAGGGACGTGGAAGAAGAACCGTTAAGGCT-CAGAAGTTGTGGTATCAGATTT 17446 Query 112291 TCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAA 112350 | || |||| || || || ||||| || | ||| ||||||| || ||||| ||| || Sbjct 17445 TGGAGGCTCAGACAGAAACCGGTACGCCTTTCATGATTTACAAGGATGCCTGCAACAGAA 17386 Query 112351 AGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTG- 112409 |||||||||||||||| ||||| |||||| ||| || | ||| | | | ||| Sbjct 17385 AGAGTAATCAAAAGAACTTGGGAACCATCAAGTCTTCGAA--TTTGTGCTGTGAGGTTGT 17328 Query 112410 -GAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGC-ATCAATCGCTCTCCCCA 112467 || | | ||||||| | |||||||||| | || | || | ||| | || Sbjct 17327 CGAGTACTCTTCTCCAGATGAGGTCGGTGTGTGTAACTTGGCAAACATTTGCT-TGCCTG 17269 Query 112468 AGTATGTGGA-TCCAGAGACAAAGA-CA-------TTTGATTATGAAAAACTCCACGAAG 112518 | ||| || ||| ||||| || || || | | ||| || | ||| | Sbjct 17268 CATTTGTTGAGTCC---GACAAGGATCACTGTTGGTTCAACTTTGAGAAGTTGCACAAGA 17212 Query 112519 TTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTT- 112577 | || || ||||||| ||| | ||| | || ||||| || |||| ||||| ||| Sbjct 17211 TCACCAAGGTTGTCACACGTAACTTGAACCGTGTCATTGACAGGAATTACTACCCAGTTC 17152 Query 112578 GAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTC 112637 ||| || || || || || |||||| || | || || | ||| ||||| |||||||| Sbjct 17151 CAGA-GGCCCGCAACTCCAACATGAGAAACAGACCTATCGCTCTTGGTGTTCAAGGTCTT 17093 Query 112638 GCGGAT---GTATTCATTCTTTG-TCGCCACGCATTTGATTCCGACGAAGCGAAGGAAAT 112693 |||||| | ||||| || | | || ||||||| | | ||||| || | Sbjct 17092 GCGGATACGTTCTTCATGCTCAGATTGC----CATTTGACTGCCCAGAAGCTCGTGAGCT 17037 Query 112694 CAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGG--CGAGTTCGGAGTTG 112751 || | ||||| ||||| |||| || | ||||| |||| | || || | Sbjct 17036 TAACATACAGATATTCGAGACCTTGTACCATGGTGCTCTGGAGGAATCAAATC--AGCTT 16979 Query 112752 GCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGG-GTGCT 112810 | | || || ||| | || || |||| || || ||||||||||| |||||| | || Sbjct 16978 TCTGTGGAAGAGGGTACGTACGAGACCTACGAAGGCTCTCCAGCTTC-CAAGGGTATTCT 16920 Query 112811 TCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGACTGGGACGCTCTCAAG 112868 || | ||||||| |||| || |||| || || | || ||||| || | ||| Sbjct 16919 CCAGTACGATATGT-GGAATAAGAAGCCAA-CTGATCTGTGGGATTGGGAGACTTTGAAG 16862 Query 112869 GAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCC 112928 | ||| || | |||||| | || |||||| | || || |||||||| ||| Sbjct 16861 GCCAAGATCGCTAAGGATGGTCTTAGAAATTCGCTTTTGGTCGCTCCTATGCCAACTGCC 16802 Query 112929 TCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTAT 112988 || ||| | || || ||||| | || || |||||||| || | ||| | ||||||||| Sbjct 16801 TCTACCTCTCAGATTATGGGTTACAACGAGTGCTTTGAGCCATTCACCTCTAACATCTAT 16742 Query 112989 CTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA--CAAGCATCTCGTGGATGACC 113046 | ||||||| || || || ||||| ||||||||| | ||| || |||| Sbjct 16741 CAGAGAAGAGTTCTTGCTGGTGAGTTCCAGATTGTCAATCCTTACATGCTAAGG--GACC 16684 Query 113047 TCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTT 113106 | | || || || | ||| | | | |||||| || |||| | | | ||| | Sbjct 16683 TTATTGATATGGGAATATGGAACGATGCAATGAAGAATTTCATCATTCATGACAATGGAT 16624 Query 113107 CCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTACCGCACAGTTTGGG 113166 ||||||| || | |||||||||| | |||||||| |||||| | || ||||||| Sbjct 16623 CCATTCAGAACTTACCTAATATTCCAGACAACATTAAGAAATTGTACAGGACTGTTTGGG 16564 Query 113167 AAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAA 113226 || | ||| |||||| |||||||| || || | ||| || |||| || Sbjct 16563 AACTTTCTCAGAAATCTGTCATCGACATGGCTGCCGACAGAGGTGCCTACATTTGCCAGT 16504 Query 113227 GTCAAAGTATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACA 113286 |||| ||||| | | || || ||||| ||| ||| | | || |||||| Sbjct 16503 CTCAATCCATGAACATCCACTTGCAATCGCCAACTATGGGTAAGTTGACGTCCATGCACT 16444 Query 113287 TGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTAC 113327 | ||| | |||||||||||| | || || || ||||| ||| Sbjct 16443 TTTACGGCTGGAAGAAGGGTTTGAAGACAGGTATGTACTAC 16403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620734811424160