Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq14 170 2e-37 seq770 86.0 7e-12 >seq14 Length=27313 Score = 170 bits (188), Expect = 2e-37 Identities = 569/880 (65%), Gaps = 13/880 (1%) Strand=Plus/Plus Query 110350 CACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCA 110409 ||||| || ||| ||| ||| ||||||||||| ||||| || |||||| ||| Sbjct 17340 CACAAATTCGAAGACTTGATGGTTCCCAAGTTCTTTTGATTACTCTTTCTGTTGCAGGCA 17399 Query 110410 TCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCAT 110469 ||||| || | |||| | || ||||| ||||| ||||| | || | ||| | ||| Sbjct 17400 TCCTTGTAAATCATGAAAGGCGTACCGGTTTCTGTCTGAGCCTCCAAAATCTGATACCAC 17459 Query 110470 A-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAA 110528 | | || | | | || ||| | | | || |||| |||||| |||||||| Sbjct 17460 AACTTCTGAGCCTTA-ACGGTTCTTCTTCCACGTCCCTCCTTCTCGTAACGAGTGTACAA 17518 Query 110529 GTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAG 110588 | ||||| || | || || ||||| |||||||| |||| ||| | || | Sbjct 17519 CTTTTCAAACTCGTCACCATAAACATCTGAAAGACCTGGGGCCTCAGAAGGAGAAAACAA 17578 Query 110589 GGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGA 110648 | ||| | || | ||||| | ||||||||| || ||||| ||||| | || | Sbjct 17579 AGTCCATGTATCATTTTGTTCAACACGCTTCATGAATAGATCAGGGATCCAAAGAGCTGG 17638 Query 110649 GAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTC 110708 ||| | ||||| ||| ||| || | ||| || || | | || | ||||| Sbjct 17639 GAACAAATCACGTGCACGGATCTCCTCCTTACCGTGATTCTTCCTGATATCGATGAAGTC 17698 Query 110709 CATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCC------CTTACGACG 110762 | |||||| | ||||| ||||| | |||| ||| |||| || ||| || Sbjct 17699 AAAGATATCTGCATGCCAAGGTTCTAAGTAGATAGCAATGGCACCTGGTCTCTTGTTACC 17758 Query 110763 ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCC 110822 ||| |||| |||||| | || || ||||| || | | |||||||||||| || Sbjct 17759 ACCT---TGGTCAACATACCTAGCAGTACTGTTGAACACACGAACCATAGGAATAATACC 17815 Query 110823 ATCGGATTGACCATTTGTACCCCTAAT-TCTGGACTTATTGGCACGAATGTCGTGGATAT 110881 || |||| ||| || ||||| ||| | || || | | | |||||||| || |||| Sbjct 17816 ATTGGATGTACCGTTGGTACCAGCAATGTATGAACCTGTAGA-ACGAATGTTATGAATAT 17874 Query 110882 GCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAAA 110941 | | |||||||||||| ||| ||| ||| ||||||| | | | || | || | Sbjct 17875 GTAGACCAATACCACCAGCCGTCTTGGAAATCAAGGCACACTGTTTCAAAGTGTCGTAGA 17934 Query 110942 TACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAG 111001 |||| ||||| || || |||| | |||| || |||||||| |||||||| || || | Sbjct 17935 TACCTTCAATAGAGTCATCCTTCATTGCAACTAAGAAGCAAGACGACATCTGTGGGCGTG 17994 Query 111002 GCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATCTTGT 111061 | || || ||||| || | ||| || | || || |||| | | |||||| | Sbjct 17995 GAGTACCGGCATTAAACAATGTTGGAGAGGCGTGTGTGAAGTATCTCTTCGACATCAAAT 18054 Query 111062 TGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGA 111121 || | || | | || | ||| | ||||||||| |||| |||||||| ||| | Sbjct 18055 CATACGACTCCAAAACTTTAGGAATATCATCACCGTGAATTCCAACGGCAACTCTCATAA 18114 Query 111122 ACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGAAGGTAACTCTTCTCTA 111181 | || |||||| | || | ||| |||| | | | || || ||||| Sbjct 18115 GAAGATGCTGAGGCCTCTCTGCAACCTTACCATTTATCCTCAACAGATATGAACGCTCTA 18174 Query 111182 GGGTCTTGAGACCAAAGTATCCAAAATCGAAATCACGATC 111221 ||||||| | |||||||| | | ||||||||| || Sbjct 18175 GGGTCTTAAAGCCAAAGTAGTTATAGCTGAAATCACGGTC 18214 >seq770 Length=113555 Score = 86.0 bits (94), Expect = 7e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 11743 TCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAGAACAC 11802 ||||| |||||| || ||||||||||| |||||||| ||||| | | | ||| || Sbjct 81372 TCACGCACACGCGAAGCACCAACACCTACAAACATCTCGACGAATTCAGAACCGGAA-AC 81314 Query 11803 TGAATGAAG-GGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGT 11861 |||| ||| |||||| | || ||||| | ||| || || | || ||||| || Sbjct 81313 TGAAAGAAATGGAACACCTGCTTCTCCAGCAGTAGCTTTGGCAAGCAACGTTTTACCTGT 81254 Query 11862 ACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCCAAAGTAGCG 11921 ||| || | |||||| | || || ||||||||||| || ||||| | ||| | Sbjct 81253 ACCGGGAGGACCAGCCAAAATAGCACCACGGGGGATTTTTGCACCCAACCGCTCGTATCT 81194 Query 11922 CTCAGGCTTCTTGAGGAAGTCCACAATCTCC 11952 || |||| ||| | ||||| |||| |||| Sbjct 81193 CTGTGGCTGCTTCAAGAAGTTGACAAACTCC 81163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588968799768400