Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq14 170 2e-37
seq770 86.0 7e-12
>seq14
Length=27313
Score = 170 bits (188), Expect = 2e-37
Identities = 569/880 (65%), Gaps = 13/880 (1%)
Strand=Plus/Plus
Query 110350 CACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCA 110409
||||| || ||| ||| ||| ||||||||||| ||||| || |||||| |||
Sbjct 17340 CACAAATTCGAAGACTTGATGGTTCCCAAGTTCTTTTGATTACTCTTTCTGTTGCAGGCA 17399
Query 110410 TCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCAT 110469
||||| || | |||| | || ||||| ||||| ||||| | || | ||| | |||
Sbjct 17400 TCCTTGTAAATCATGAAAGGCGTACCGGTTTCTGTCTGAGCCTCCAAAATCTGATACCAC 17459
Query 110470 A-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAA 110528
| | || | | | || ||| | | | || |||| |||||| ||||||||
Sbjct 17460 AACTTCTGAGCCTTA-ACGGTTCTTCTTCCACGTCCCTCCTTCTCGTAACGAGTGTACAA 17518
Query 110529 GTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAG 110588
| ||||| || | || || ||||| |||||||| |||| ||| | || |
Sbjct 17519 CTTTTCAAACTCGTCACCATAAACATCTGAAAGACCTGGGGCCTCAGAAGGAGAAAACAA 17578
Query 110589 GGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGA 110648
| ||| | || | ||||| | ||||||||| || ||||| ||||| | || |
Sbjct 17579 AGTCCATGTATCATTTTGTTCAACACGCTTCATGAATAGATCAGGGATCCAAAGAGCTGG 17638
Query 110649 GAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTC 110708
||| | ||||| ||| ||| || | ||| || || | | || | |||||
Sbjct 17639 GAACAAATCACGTGCACGGATCTCCTCCTTACCGTGATTCTTCCTGATATCGATGAAGTC 17698
Query 110709 CATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCC------CTTACGACG 110762
| |||||| | ||||| ||||| | |||| ||| |||| || ||| ||
Sbjct 17699 AAAGATATCTGCATGCCAAGGTTCTAAGTAGATAGCAATGGCACCTGGTCTCTTGTTACC 17758
Query 110763 ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCC 110822
||| |||| |||||| | || || ||||| || | | |||||||||||| ||
Sbjct 17759 ACCT---TGGTCAACATACCTAGCAGTACTGTTGAACACACGAACCATAGGAATAATACC 17815
Query 110823 ATCGGATTGACCATTTGTACCCCTAAT-TCTGGACTTATTGGCACGAATGTCGTGGATAT 110881
|| |||| ||| || ||||| ||| | || || | | | |||||||| || ||||
Sbjct 17816 ATTGGATGTACCGTTGGTACCAGCAATGTATGAACCTGTAGA-ACGAATGTTATGAATAT 17874
Query 110882 GCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAAA 110941
| | |||||||||||| ||| ||| ||| ||||||| | | | || | || |
Sbjct 17875 GTAGACCAATACCACCAGCCGTCTTGGAAATCAAGGCACACTGTTTCAAAGTGTCGTAGA 17934
Query 110942 TACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAG 111001
|||| ||||| || || |||| | |||| || |||||||| |||||||| || || |
Sbjct 17935 TACCTTCAATAGAGTCATCCTTCATTGCAACTAAGAAGCAAGACGACATCTGTGGGCGTG 17994
Query 111002 GCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATCTTGT 111061
| || || ||||| || | ||| || | || || |||| | | |||||| |
Sbjct 17995 GAGTACCGGCATTAAACAATGTTGGAGAGGCGTGTGTGAAGTATCTCTTCGACATCAAAT 18054
Query 111062 TGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGA 111121
|| | || | | || | ||| | ||||||||| |||| |||||||| ||| |
Sbjct 18055 CATACGACTCCAAAACTTTAGGAATATCATCACCGTGAATTCCAACGGCAACTCTCATAA 18114
Query 111122 ACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGAAGGTAACTCTTCTCTA 111181
| || |||||| | || | ||| |||| | | | || || |||||
Sbjct 18115 GAAGATGCTGAGGCCTCTCTGCAACCTTACCATTTATCCTCAACAGATATGAACGCTCTA 18174
Query 111182 GGGTCTTGAGACCAAAGTATCCAAAATCGAAATCACGATC 111221
||||||| | |||||||| | | ||||||||| ||
Sbjct 18175 GGGTCTTAAAGCCAAAGTAGTTATAGCTGAAATCACGGTC 18214
>seq770
Length=113555
Score = 86.0 bits (94), Expect = 7e-12
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 11743 TCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAGAACAC 11802
||||| |||||| || ||||||||||| |||||||| ||||| | | | ||| ||
Sbjct 81372 TCACGCACACGCGAAGCACCAACACCTACAAACATCTCGACGAATTCAGAACCGGAA-AC 81314
Query 11803 TGAATGAAG-GGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGT 11861
|||| ||| |||||| | || ||||| | ||| || || | || ||||| ||
Sbjct 81313 TGAAAGAAATGGAACACCTGCTTCTCCAGCAGTAGCTTTGGCAAGCAACGTTTTACCTGT 81254
Query 11862 ACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCCAAAGTAGCG 11921
||| || | |||||| | || || ||||||||||| || ||||| | ||| |
Sbjct 81253 ACCGGGAGGACCAGCCAAAATAGCACCACGGGGGATTTTTGCACCCAACCGCTCGTATCT 81194
Query 11922 CTCAGGCTTCTTGAGGAAGTCCACAATCTCC 11952
|| |||| ||| | ||||| |||| ||||
Sbjct 81193 CTGTGGCTGCTTCAAGAAGTTGACAAACTCC 81163
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588968799768400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |