Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq14 226 3e-54
seq290 84.2 3e-11
>seq14
Length=27313
Score = 226 bits (250), Expect = 3e-54
Identities = 918/1426 (64%), Gaps = 39/1426 (3%)
Strand=Plus/Plus
Query 105896 TTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGT 105955
||||||||| ||||| || || || ||||||| |||||||||| | ||| | ||
Sbjct 16704 TTGACAATCTGGAACTCACCAGCAAGAACTCTTCTCTGATAGATGTTAGAGGTGAATGGC 16763
Query 105956 TCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATC 106015
|||||||| || || | ||||| || || | ||| ||||| |||||||| || || | |
Sbjct 16764 TCAAAGCACTCGTTGTAACCCATAATCTGAGAGGTAGAGGCAGTTGGCATAGGAGCGACC 16823
Query 106016 AAAAGACTGTTACGAAGACCCTTTTCCTT---GATGCGTTCCTTGAGAACATCCCAGTCG 106072
||||| || | |||||| | |||| ||| |||| | | ||||| ||
Sbjct 16824 AAAAGCGAATTTCTAAGACCAT---CCTTAGCGATCTTGGCCTTCAAAGTCTCCCAATCC 16880
Query 106073 TA--GTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGG 106130
| | | || |||| ||| |||| ||||||| | || || | || | ||| | |
Sbjct 16881 CACAGATCAG-TTGGCTTCTTATTCC-ACATATCGTACTGGAGAATACCCTTGGAAGCTG 16938
Query 106131 GAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCA 106190
|||| || || | ||||| || | ||| | | ||| | | | ||||||
Sbjct 16939 GAGAGCCTTCGTAGGTCTCGTACGTACCCTCTTCCACAGAAAGCTGATTTGATTCCTCCA 16998
Query 106191 GGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAAT 106250
| | | || |||| ||| || || || | || | ||| ||||| | |
Sbjct 16999 GAGCACCATGGTACAAGGTCTCGAATATCTGTATGTTAAGCTCACGAGCTTCTGGGCAGT 17058
Query 106251 CAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAG 106310
|||||| | | | || | || |||||| |||||||||||||| | | | ||||
Sbjct 17059 CAAATGGCAATCTGAGCATGAAGAACGTATCCGCAAGACCTTGAACACCAAGAGCGATAG 17118
Query 106311 GTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC-AACGGGATAAAAATTTCTGTCAATG 106369
|||||| || ||| || || || || || ||| ||| || || |||| |||||||||
Sbjct 17119 GTCTGTTTCTCATGTTGGAGTTGCGGGCC-TCTGGAACTGGGTAGTAATTCCTGTCAATG 17177
Query 106370 ACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAAT----- 106424
|| ||||| | || || |||| ||| ||||| | || | || ||| | |
Sbjct 17178 ACACGGTTCAAGTTACGTGTGACAACCTTGGTGATCTTGTGCAACTTCTCAAAGTTGAAC 17237
Query 106425 CAAAAGTGCGAGTCTCTTCA---TTGACATACTTTGGAAGGGCGATTGATGCCAAATTGC 106481
||| |||| | || || | ||| | || | | || |||||| || |
Sbjct 17238 CAACAGTG--ATCCTTGTCGGACTCAACAAATGCAGGCAAGCAAATGTTTGCCAAGTTAC 17295
Query 106482 AAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCT 106541
| ||| | |||||| | | |||||| | || || ||||| || ||| ||
Sbjct 17296 ACACACCGACCTCATCTGGAGAAGAGTACTCGACAACCTCACAGCACAAATTCGAAGACT 17355
Query 106542 TAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGT 106601
| || || ||||| |||||||| ||||||||| ||||||| ||||||||||| | ||||
Sbjct 17356 TGATGGTTCCCAAGTTCTTTTGATTACTCTTTCTGTTGCAGGCATCCTTGTAAATCATGA 17415
Query 106602 AGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCAC-ACATCGGCGGCTGGT 106660
| ||||| || || || ||||| | || | ||| | |||| || || | | ||
Sbjct 17416 AAGGCGTACCGGTTTCTGTCTGAGCCTCCAAAATCTGATACCACAACTTCTGAGCCT--- 17472
Query 106661 ACAATGG--CGT-TGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCC 106717
|| || | | | | ||||||||| |||||| ||||| | |||||||||
Sbjct 17473 -TAACGGTTCTTCTTCCACGTCCCTCCTTCTCGTAACGAGTGTACAACTTTTCAAACTCG 17531
Query 106718 TCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCA 106777
||||| | || || |||||||| |||| ||| | || | || |||| | ||
Sbjct 17532 TCACCATAAACATCTGAAAGACCTGGGGCCTCAGAAGGAGAAAACAAAGTCCATGTATCA 17591
Query 106778 CCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTC-T 106836
| ||||| ||||||||||| || || || ||||| || | || || | ||| | |
Sbjct 17592 TTTTGTTCAACACGCTTCATGAATAGATCAGGGATCCAAAGAGCTGGGAACAAATCACGT 17651
Query 106837 ACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGC 106896
||| || ||| || | ||| || || | | || | ||| || | |||||| ||
Sbjct 17652 GCACGGA-TCTCCTCCTTACCGTGATTCTTCCTGATATCGATGAAGTCAAAGATATCTGC 17710
Query 106897 GTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTTA 106952
||||| || || | |||| || || | || || | | ||| |||| | |
Sbjct 17711 ATGCCAAGGTTCTAAGTAGATAGCAATGGCACCTGGTCTCTTG-TTACCACCTTGGTCAA 17769
Query 106953 CATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCAT 107012
|||| | || || ||| || || |||| ||| ||||||||||||| ||| ||| |
Sbjct 17770 CATACCTAGCAGTACTGTTGAACACACGAACCATAGGAATAATACCATTGGATGTACCGT 17829
Query 107013 TTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCC 107072
| || || ||| || | | | | | ||| || || | |||||||| |
Sbjct 17830 TGGTACCAGCAATGTATGAACCTGTAGAACGAATGTTATGAATATGTAGACCAATACCAC 17889
Query 107073 CAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGT 107132
||||| ||| || || ||||||| | | ||| | |||||||| | || ||||
Sbjct 17890 CAGCCGTCTTGGAAATCAAGGCACACTGTTTCAAAGTGTCGTAGATACCTTCAATAGAGT 17949
Query 107133 CCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGA 107192
| ||||| | || | | ||||||| |||||||| || | ||| ||||| ||||| |
Sbjct 17950 CATCCTTCATTGCAACTAAGAAGCAAGACGACATCTGTGGGCGTGGAGTACCGGCATTAA 18009
Query 107193 AGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAG 107251
| | ||||| | ||||| |||| || || | |||||| || || | ||||||
Sbjct 18010 ACAATGTTGGAGAGGCGTGTGTGAA-GTATCTCTTCGACATCAAATCATACGACTCCAAA 18068
Query 107252 ACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAA 107297
|| | ||| || || ||||| || || | ||| || | |||||
Sbjct 18069 ACTTTAGGAATATCATCACCGTGAATTCCAACGGCAACTCTCATAA 18114
>seq290
Length=58723
Score = 84.2 bits (92), Expect = 3e-11
Identities = 278/422 (66%), Gaps = 18/422 (4%)
Strand=Plus/Plus
Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045
||||| ||||| ||||||||||||||| ||||| ||| | | | |||||| ||||||
Sbjct 52803 TAGTCAGAAACTCTCTTCTCAAAGAAGTTAGTCTTACCAGCCAAGGAAATGTTCTCCATA 52862
Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-TGGGTGGCACCCCAACTTGTTTGAGGAGACG 117104
||||| |||||||| | || || ||| | | || ||||| | || | |
Sbjct 52863 AAGTCGAATGGATTGGTAGCATTGTAAACTTTCTCACATCCCAAAGCAATA-AGCAATCT 52921
Query 117105 ATCCGACACATACT-CAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATTAC 117163
|| | |||| | | ||| || | || |||| | || |||||||||| | | | |
Sbjct 52922 GTCGG-CACAGAATTCAACATAATGGGCCATCATATCGAAGTTCATACCAAGCAAAGAAA 52980
Query 117164 ATGGGAGTGCGTC---CAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 117220
|||||| || || | ||| || ||| |||||| | || ||||| ||| ||
Sbjct 52981 CTGGGAGAGCATCACTCCAGA--AAGTCTT-CTCAATATTGACAGCCTCGGTCATAATTT 53037
Query 117221 CGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGA-AGAGCTCCACG---GCA 117276
| ||| | | || | ||| || |||| ||| ||| | | | ||
Sbjct 53038 TCTTAATAATAACCTTACTAGGTGGATGCTTCAAA----TGAGAGAACAAGAGGCATGCG 53093
Query 117277 AACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGC 117336
|| || || ||||||||||| | | ||||||| ||||| |||||| || || |||
Sbjct 53094 AAATCAGTATGTAGACCCTCATCCCTGCAAATAAGCTCATTGGAGAAGGTAAGTCCAGGC 53153
Query 117337 ATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCC 117396
|| | ||| | |||||||||||| | |||| | || || || |||||||| | ||||
Sbjct 53154 ATCAAACCTCTCTTCTTCAACCAGAAGATAGAGGCAAACGAGCCAGAGAAGAAAACACCC 53213
Query 117397 TC 117398
||
Sbjct 53214 TC 53215
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589973587484720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |