Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq417 129 7e-25 >seq417 Length=5299 Score = 129 bits (142), Expect = 7e-25 Identities = 199/281 (71%), Gaps = 6/281 (2%) Strand=Plus/Minus Query 153747 GATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCAT 153806 |||||||| ||||| | ||||| |||||| |||| ||||| | ||| ||||| || Sbjct 3544 GATATTGCCCTAGGTTCTGCCCAAAGATTTGGTGTTCCGATGGGCTTTGGTGGTCCGTAT 3485 Query 153807 GCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGT 153866 |||||||| || || | ||| || || |||||||| || || ||| | || ||| Sbjct 3484 GCTGCATTTTTGGCCGTTAAAGATTCGTTAAAAAGAAAGATGCCGGGAAGATTGGTCGGT 3425 Query 153867 CAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAG 153926 || |||||| || ||| || | ||| | || || || || ||||||||| Sbjct 3424 GTCTCTAAAGATAGACTCGGCAATCCGGCTTTGAGACTTGCTCTTCAAACCAGAGAGCAG 3365 Query 153927 CATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAAT 153986 |||||||| ||||| || || ||| |||||||||||| || |||||||| |||| || Sbjct 3364 CATATCAGAAGAGAGAAGGCCACCTCTAACATCTGCACTGCCCAGGCACTTTTGGCCAAC 3305 Query 153987 ATGTCTGGA--TTC-TATGCAGCATATCATGGTGCAGATGG 154024 | || | ||| ||||| | ||||||||| |||| || Sbjct 3304 GT---TGCATCTTCTTATGCCGTGTATCATGGTCCAGAAGG 3267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579205719123520