Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq417 118 1e-21 >seq417 Length=5299 Score = 118 bits (130), Expect = 1e-21 Identities = 193/278 (69%), Gaps = 0/278 (0%) Strand=Plus/Minus Query 158422 GACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCAT 158481 || ||||| ||||| | ||||| |||||| |||| ||||| | || ||||| || Sbjct 3544 GATATTGCCCTAGGTTCTGCCCAAAGATTTGGTGTTCCGATGGGCTTTGGTGGTCCGTAT 3485 Query 158482 GCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGT 158541 |||||||| || || | ||| || || |||||||| || || ||| | || ||| Sbjct 3484 GCTGCATTTTTGGCCGTTAAAGATTCGTTAAAAAGAAAGATGCCGGGAAGATTGGTCGGT 3425 Query 158542 CAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAG 158601 || |||||| || ||| || | ||| | || || || || ||||||||| Sbjct 3424 GTCTCTAAAGATAGACTCGGCAATCCGGCTTTGAGACTTGCTCTTCAAACCAGAGAGCAG 3365 Query 158602 CATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAAT 158661 |||||||||||||| || || ||| |||||||||||| || || ||||| |||| || Sbjct 3364 CATATCAGAAGAGAGAAGGCCACCTCTAACATCTGCACTGCCCAGGCACTTTTGGCCAAC 3305 Query 158662 ATGTCTGGGTTCTATGCAGCATATCATGGTGCAGATGG 158699 | | | ||||| | ||||||||| |||| || Sbjct 3304 GTTGCATCTTCTTATGCCGTGTATCATGGTCCAGAAGG 3267 Score = 82.4 bits (90), Expect = 9e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 159625 GGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCA 159684 || |||| || || | ||||||||||| | ||||| ||||| |||||| | ||| Sbjct 2314 GGGGGTCTCGTGTACATGGATGGTGCAAACATGAATGCCCAGGTTGGTCTAACGTCGCCA 2255 Query 159685 TGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACAT 159744 | || | ||||| ||| | || || | ||| | || ||||| ||||| || ||||| Sbjct 2254 TCCGATTTGGGTGCCGATCTCTGCCACTTGAACCTCCACAAGACTTTCTGCATACCACAC 2195 Query 159745 GGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 |||||||| || ||||| || || || || |||| Sbjct 2194 GGAGGTGGTGGACCTGGTGTTGGACCAATATGTGT 2160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588044011074080