Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq423 132 4e-26
seq208 123 2e-23
>seq423
Length=50725
Score = 132 bits (146), Expect = 4e-26
Identities = 157/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613
||| ||||| || || ||| ||| || ||||| ||||| ||||| | | ||| ||||
Sbjct 3611 CAAAACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGACAAAGTTCTGCCGTC 3670
Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
|||||||||||||| ||||| |||| || ||| ||||| | |||| |||||||||||
Sbjct 3671 CTCCAACTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGGAATTCCCTCCTTGTC 3730
Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733
||||||||||| ||| | | || || || | ||| ||||| | || || ||
Sbjct 3731 TTGGATCTTTTGTTTGACATTGTCAATAGTGTCGGAAGACTCAACCTCAAGGGTGATGGT 3790
Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || |||||||| || || ||||| |||||
Sbjct 3791 CTTACCGGTCAAAGTCTTAACGAAAATTTGCAT 3823
>seq208
Length=10633
Score = 123 bits (136), Expect = 2e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613
||| ||||| || || || ||| ||||| || ||||| ||||| | | ||| | ||
Sbjct 9466 CAAGACCAAGTGAAGAGTTGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATC 9525
Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
|||||||||||||||||||| |||| || ||| ||||| | || | |||||||| ||
Sbjct 9526 CTCCAACTGCTTACCGGCAAAGATCAATCTCTGCTGATCAGGTGGGATTCCCTCCTTATC 9585
Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733
|||||||| || ||| | | | ||||| | ||||||||||| || || ||
Sbjct 9586 CTGGATCTTTTGCTTGACATTGTCAATGGTGTCTGAAGACTCCACCTCCAAGGTGATAGT 9645
Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| |||||||| || || || ||||| |||||
Sbjct 9646 CTTACCCGTCAAGGTCTTAACGAAAATTTGCAT 9678
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380933059461894
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |