Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq423 132 4e-26 seq208 123 2e-23 >seq423 Length=50725 Score = 132 bits (146), Expect = 4e-26 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||| ||||| || || ||| ||| || ||||| ||||| ||||| | | ||| |||| Sbjct 3611 CAAAACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGACAAAGTTCTGCCGTC 3670 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 |||||||||||||| ||||| |||| || ||| ||||| | |||| ||||||||||| Sbjct 3671 CTCCAACTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGGAATTCCCTCCTTGTC 3730 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 ||||||||||| ||| | | || || || | ||| ||||| | || || || Sbjct 3731 TTGGATCTTTTGTTTGACATTGTCAATAGTGTCGGAAGACTCAACCTCAAGGGTGATGGT 3790 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || |||||||| || || ||||| ||||| Sbjct 3791 CTTACCGGTCAAAGTCTTAACGAAAATTTGCAT 3823 >seq208 Length=10633 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||| ||||| || || || ||| ||||| || ||||| ||||| | | ||| | || Sbjct 9466 CAAGACCAAGTGAAGAGTTGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATC 9525 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 |||||||||||||||||||| |||| || ||| ||||| | || | |||||||| || Sbjct 9526 CTCCAACTGCTTACCGGCAAAGATCAATCTCTGCTGATCAGGTGGGATTCCCTCCTTATC 9585 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 |||||||| || ||| | | | ||||| | ||||||||||| || || || Sbjct 9586 CTGGATCTTTTGCTTGACATTGTCAATGGTGTCTGAAGACTCCACCTCCAAGGTGATAGT 9645 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || |||||||| || || || ||||| ||||| Sbjct 9646 CTTACCCGTCAAGGTCTTAACGAAAATTTGCAT 9678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380933059461894