Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq187 174 3e-38
seq14 127 4e-24
seq290 109 1e-18
>seq187
Length=11729
Score = 174 bits (192), Expect = 3e-38
Identities = 246/341 (72%), Gaps = 6/341 (2%)
Strand=Plus/Minus
Query 222008 AGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCC 222067
|||||||| || || | | ||||| | ||||||| | ||| || ||||||| ||
Sbjct 2330 AGACTCCACACCTGGTCCTTCTCGACCCGCCGCATGAACAAGTCGGGAATCCACAATGCA 2271
Query 222068 TGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAAC 222127
| || ||||| | || |||| ||||||| ||||| ||||||| ||| ||| | ||
Sbjct 2270 TAGAATAGATCCCGGGCCCGCATCTCCTCCTTGCCGTGGTTTTTCTTCAAATCGAGGAAT 2211
Query 222128 TCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGA--GCGCCGGGTCGCTTGT 222185
|| | ||||| || ||||||||||||| || ||| || | || ||||| |||||||
Sbjct 2210 TCCATGATGTCTGCATGCCACGGCTCCAAAT--ACGCACAAATCGCACCGGGCCGCTTGT 2153
Query 222186 TGCCACCCTGATCCACCATCCTCTCCAGAGC-GTTGAAGATGCGAAGGGTCGGTACCAGT 222244
| || ||||| |||| ||| || ||| || |||||| | || || |||| || |
Sbjct 2152 TTCCGCCCTGGTCCA-CATACTTGGCAGTGCTGTTGAACACCCGGAGCATCGGAACTATG 2094
Query 222245 CCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCA 222304
||| ||||| |||||||||||| |||||||| ||| | |||| | |||||||
Sbjct 2093 CCGCTGGATGTCCCGTTGGTGCCCGAAATGTACGTTCCGGCCGCCCGAACGTTACTGAGG 2034
Query 222305 GACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCA 222345
||| ||||| ||||| ||| |||||||||||| || ||
Sbjct 2033 TGCATTCCGATTCCACCCGCGGCTTTCGAGATCATCGCACA 1993
>seq14
Length=27313
Score = 127 bits (140), Expect = 4e-24
Identities = 512/794 (64%), Gaps = 23/794 (3%)
Strand=Plus/Plus
Query 221781 ACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCA 221840
|||||||||| |||| || || |||||| ||| | ||| || |||||||| | ||
Sbjct 17353 ACTTGATGGTTCCCAAGTTCTTTTGATTACTCTTTCTGTTGCAGGCATCCTTGTAAATCA 17412
Query 221841 TAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTG-GCG 221899
| || || || || || ||||||| ||| ||||| | ||| | | |||| ||
Sbjct 17413 TGAAAGGCGTACCGGTTTCTGTCTGAGCCTCCAAAATCTGATACCACAACT-TCTGAGCC 17471
Query 221900 CTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAAC 221959
| || || || | | ||||| ||| || || | || || | | | ||||||
Sbjct 17472 TTAACGGTTCTTCTTCCACGTCCCTC---CTTCTCGTAACGAGTGTACAACTTTTCAAAC 17528
Query 221960 TTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGTGC 222019
| ||||| || | || || ||||| | | ||| | | || | ||||
Sbjct 17529 TCGTCACCATAAACATCTGAAAGACCTGGGGCCTCAGAAGGAGAAAACAAAGTCCATGTA 17588
Query 222020 TTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCT 222079
| || | || || | || |||||| || || |||||||| || || | || | |||
Sbjct 17589 TCATTTTGTTCAACACGCTTCATGAATAGATCAGGGATCCAAAGAGCTGGGAACAAATCA 17648
Query 222080 CTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCA 222139
| | || ||||||| |||| || ||||| | ||| | || ||||| || ||
Sbjct 17649 CGTGCACGGATCTCCTCCTTACCGTGATTCTTCCTGATATCGATGAAGTCAAAGATATCT 17708
Query 222140 GCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCC 222199
|| ||||| || || | |||| || | || || |||| |||||| ||||| || ||
Sbjct 17709 GCATGCCAAGGTTCTAAGTAGATAGCAATGGCACCTGGTCTCTTGTTACCACCTTGGTCA 17768
Query 222200 ACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCG 222259
|| ||| | | |||||| | |||| | || | | || |||||| ||||
Sbjct 17769 ACATACCTAGCAGTACTGTTGAACACACGAACCATAGGAATAATACCATTGGATGTACCG 17828
Query 222260 TTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACATG----CCGAT 222315
||||| || |||||| | ||| | | | |||| || | ||| || ||
Sbjct 17829 TTGGTACCAGCAATGTATGAACCTGTAGAACGAATGTTA-TGA---ATATGTAGACCAAT 17884
Query 222316 ACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCAT 222375
|||||| || || || |||| ||| || || | |||||| ||| || || ||
Sbjct 17885 ACCACCAGCCGTCTTGGAAATCAAGGCACACTGTTTCAAAGTGTCGTAGATACCTTCAAT 17944
Query 222376 AGAGTCCTCCTTGACGTTCAGCAGAAAA-CAAGACGACATCTGAGATTTGGTGGA--ACA 222432
|||||| ||||| | | || | | || |||||||||||||| | ||||| ||
Sbjct 17945 AGAGTCATCCTTCAT-TGCAACTAAGAAGCAAGACGACATCTGTG--GGCGTGGAGTACC 18001
Query 222433 GGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGT 222492
||| ||||||| || ||| ||||||||| ||||| | | | ||||||| ||| ||||
Sbjct 18002 GGCATTAAACAATGTTGGAGAGGCGTGTGTGAAGTATCTCTTCGACATCAAATCATACGA 18061
Query 222493 CTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCAT--GTACATG 222550
||| | ||| | | || | || |||||||| | ||| |||||| | | |||
Sbjct 18062 CTCCAAAACTTTAGGAATATCATCACCGTGAATTCCAACGGCAACTCTCATAAGAAGATG 18121
Query 222551 TACTGGGGCCTCTC 222564
||| ||||||||
Sbjct 18122 --CTGAGGCCTCTC 18133
>seq290
Length=58723
Score = 109 bits (120), Expect = 1e-18
Identities = 372/572 (65%), Gaps = 21/572 (4%)
Strand=Plus/Minus
Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533
||||||||| | ||||| |||||||| | ||| ||||| || || |||||||||
Sbjct 53647 GATATATGGCAAATGTATAAGAAGGCGGAGGCCTCTTTTTGGACTGCTGAGGAGATTGAT 53588
Query 25534 CTGGCCAAGGACATGGACGGCTGGTAC-----GCTCTAT-CCAAAGACGAGCAGCATTTT 25587
|| | |||||| || | |||| || | | || |||| || ||| | || |
Sbjct 53587 CTCTCTAAGGACTTGACTGACTGGAACAACAAGATGAATGCCAACGA-GAGATACTTTAT 53529
Query 25588 CTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGC 25647
|| || || |||||||| ||||| || ||||||||||| || ||||||| ||
Sbjct 53528 ATCGCGT--GTTTTGGCATTTTTTGCCGCTTCTGATGGTATTGTTGACGAGAACTTGGCA 53471
Query 25648 GAGAGATTCACCAGGGAAGTGCAGT-ACGTGGAGGCCAAGTGT-TTCTACGGTTTCCAGA 25705
| | |||| | | | || || | || | || |||| | || |||||||||||||
Sbjct 53470 CAAAATTTCATGAAGCAGGTTCAATTACCAGAAG--CAAGAGCCTTTTACGGTTTCCAGA 53413
Query 25706 TGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAG 25765
| | || || | ||||||||| || || | || |||||||| || |
Sbjct 53412 TTATGGTTGAGAACATCCACTCTGAGACCTACTCCCTTTTACTTGAAACGTACATCACCG 53353
Query 25766 ACGTCGCCGAGAGAGATCGGCTGTTTGGT----GCCATCGAGCACATACCCAGCATCAAG 25821
|| || ||| || || ||| | || ||| | ||| || || |||
Sbjct 53352 ACAA----GAAGGAGTCCGACTACTTGTTCAATGCTATCCATACCATTCCACCTATTAAG 53297
Query 25822 AGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGG 25881
||||| | ||||| ||| ||||| |||| | ||| || || ||| |
Sbjct 53296 GAAAAGGCTCTATGGGCTTTGAGATGGATAAACAATGATGATGCTTTGTATGCTGAGAGA 53237
Query 25882 CTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTC 25941
|||| ||||||||||| | ||||| | || ||| || |||||||| | ||||||
Sbjct 53236 TTGGTCGCCTTTGCTGCCATCGAGGGTGTTTTCTTCTCTGGCTCGTTTGCCTCTATCTTC 53177
Query 25942 TGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGG 26001
||| | ||| ||| || ||||| || || ||| ||||| ||||| || |||||
Sbjct 53176 TGGTTGAAGAAGAGAGGTTTGATGCCTGGACTTACCTTCTCCAATGAGCTTATTTGCAGG 53117
Query 26002 GACGAGGGTCTCCACAGAGATTTTGCCTGCCT 26033
|| |||||||| || | ||||| || |||||
Sbjct 53116 GATGAGGGTCTACATACTGATTTCGCATGCCT 53085
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928833444872320
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