Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq14 127 1e-24 >seq14 Length=27313 Score = 127 bits (140), Expect = 1e-24 Identities = 304/456 (67%), Gaps = 3/456 (1%) Strand=Plus/Plus Query 25914 CATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTC 25973 ||||||| ||||| || ||| |||| ||| || ||||| | || || ||||| | Sbjct 17590 CATTTTGTTCAACACGCTTCATGAATAGATCAGGGATCCAAAGAGCTGGGAACAAATCAC 17649 Query 25974 TCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTG 26033 || | || || || || ||||||||||| | | ||| | ||| ||||| ||||||| Sbjct 17650 GTGCACGGATCTCCTCCTTACCGTGATTCTTCCTGATATCGATGAAGTCAAAGATATCTG 17709 Query 26034 AGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTA 26093 ||||| |||||||| |||||||||| |||| ||| || |||||||| || | Sbjct 17710 CATGCCAAGGTTCTAAGTAGATAGCAATGGCACCTGGTCTCTTGTTACCACCTTGGTCAA 17769 Query 26094 CGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAAT-CCAGTTGAAAATCCG 26152 | || || ||||| ||||| || | ||| |||| |||| ||| | || ||| Sbjct 17770 CATACCTAGCAGTACTGTTGAACACACGAACCATAGGAA-TAATACCATTGGATGTACCG 17828 Query 26153 TTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCA 26212 || || | | ||| | || ||||| || | ||| | ||| ||| | ||| || ||| Sbjct 17829 TTGGTACCAGCAATGTATGAACCTGTAGAACGAATGTTATGAATATGTAGACCAATACCA 17888 Query 26213 CCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTA 26272 |||||| || ||||| ||||| | | | || ||| | || |||| || Sbjct 17889 CCAGCCGTCTTGGAAATCAAGGCACACTGTTTCAAAGTGTCGTAGATACCTTCAATAGAG 17948 Query 26273 TCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTA 26332 ||| | |||||| | | ||| || ||||| || | || | | | || || | |||| Sbjct 17949 TCATCCTTCATTGCAACTAAGAAGCAAGACGACATCTGTGGGCGTGGAGTACCGGCATTA 18008 Query 26333 AATAATGTCGGTGTAGCATGAGTATAATATC-CTTC 26367 || ||||| || | || || || | |||| |||| Sbjct 18009 AACAATGTTGGAGAGGCGTGTGTGAAGTATCTCTTC 18044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253036983921350