Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq14 127 1e-24
>seq14
Length=27313
Score = 127 bits (140), Expect = 1e-24
Identities = 304/456 (67%), Gaps = 3/456 (1%)
Strand=Plus/Plus
Query 25914 CATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTC 25973
||||||| ||||| || ||| |||| ||| || ||||| | || || ||||| |
Sbjct 17590 CATTTTGTTCAACACGCTTCATGAATAGATCAGGGATCCAAAGAGCTGGGAACAAATCAC 17649
Query 25974 TCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTG 26033
|| | || || || || ||||||||||| | | ||| | ||| ||||| |||||||
Sbjct 17650 GTGCACGGATCTCCTCCTTACCGTGATTCTTCCTGATATCGATGAAGTCAAAGATATCTG 17709
Query 26034 AGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTA 26093
||||| |||||||| |||||||||| |||| ||| || |||||||| || |
Sbjct 17710 CATGCCAAGGTTCTAAGTAGATAGCAATGGCACCTGGTCTCTTGTTACCACCTTGGTCAA 17769
Query 26094 CGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAAT-CCAGTTGAAAATCCG 26152
| || || ||||| ||||| || | ||| |||| |||| ||| | || |||
Sbjct 17770 CATACCTAGCAGTACTGTTGAACACACGAACCATAGGAA-TAATACCATTGGATGTACCG 17828
Query 26153 TTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCA 26212
|| || | | ||| | || ||||| || | ||| | ||| ||| | ||| || |||
Sbjct 17829 TTGGTACCAGCAATGTATGAACCTGTAGAACGAATGTTATGAATATGTAGACCAATACCA 17888
Query 26213 CCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTA 26272
|||||| || ||||| ||||| | | | || ||| | || |||| ||
Sbjct 17889 CCAGCCGTCTTGGAAATCAAGGCACACTGTTTCAAAGTGTCGTAGATACCTTCAATAGAG 17948
Query 26273 TCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTA 26332
||| | |||||| | | ||| || ||||| || | || | | | || || | ||||
Sbjct 17949 TCATCCTTCATTGCAACTAAGAAGCAAGACGACATCTGTGGGCGTGGAGTACCGGCATTA 18008
Query 26333 AATAATGTCGGTGTAGCATGAGTATAATATC-CTTC 26367
|| ||||| || | || || || | |||| ||||
Sbjct 18009 AACAATGTTGGAGAGGCGTGTGTGAAGTATCTCTTC 18044
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253036983921350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |