Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq417 125 8e-24 >seq417 Length=5299 Score = 125 bits (138), Expect = 8e-24 Identities = 198/281 (70%), Gaps = 6/281 (2%) Strand=Plus/Plus Query 139263 CCATCTGCACCATGATATGCTGCATA-GAA--TCCAGACATATTTGCGAGCAGTGCTTGT 139319 || |||| ||||||||| | ||||| ||| | || | || || | ||||| || Sbjct 3267 CCTTCTGGACCATGATACACGGCATAAGAAGATGCA---ACGTTGGCCAAAAGTGCCTGG 3323 Query 139320 GCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGT 139379 || |||||||||||| ||| || || |||||||| |||||||||||||| ||||| || Sbjct 3324 GCAGTGCAGATGTTAGAGGTGGCCTTCTCTCTTCTGATATGCTGCTCTCTGGTTTGAAGA 3383 Query 139380 GCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGT 139439 || | ||| | || |||||||| || || || ||| || | ||| || || Sbjct 3384 GCAAGTCTCAAAGCCGGATTGCCGAGTCTATCTTTAGAGACACCGACCAATCTTCCCGGC 3443 Query 139440 ATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCC 139499 |||||||| || || ||| | || || |||||||||| ||||| || | ||| Sbjct 3444 ATCTTTCTTTTTAACGAATCTTTAACGGCCAAAAATGCAGCATACGGACCACCAAAGCCC 3503 Query 139500 ATAGGAATACCAAACCTTTGCATACTACCTACAGCAATATC 139540 || |||| |||||| ||||| | ||||| |||||||| Sbjct 3504 ATCGGAACACCAAATCTTTGGGCAGAACCTAGGGCAATATC 3544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578991321744560