Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq417 125 8e-24
>seq417
Length=5299
Score = 125 bits (138), Expect = 8e-24
Identities = 198/281 (70%), Gaps = 6/281 (2%)
Strand=Plus/Plus
Query 139263 CCATCTGCACCATGATATGCTGCATA-GAA--TCCAGACATATTTGCGAGCAGTGCTTGT 139319
|| |||| ||||||||| | ||||| ||| | || | || || | ||||| ||
Sbjct 3267 CCTTCTGGACCATGATACACGGCATAAGAAGATGCA---ACGTTGGCCAAAAGTGCCTGG 3323
Query 139320 GCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGT 139379
|| |||||||||||| ||| || || |||||||| |||||||||||||| ||||| ||
Sbjct 3324 GCAGTGCAGATGTTAGAGGTGGCCTTCTCTCTTCTGATATGCTGCTCTCTGGTTTGAAGA 3383
Query 139380 GCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGT 139439
|| | ||| | || |||||||| || || || ||| || | ||| || ||
Sbjct 3384 GCAAGTCTCAAAGCCGGATTGCCGAGTCTATCTTTAGAGACACCGACCAATCTTCCCGGC 3443
Query 139440 ATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCC 139499
|||||||| || || ||| | || || |||||||||| ||||| || | |||
Sbjct 3444 ATCTTTCTTTTTAACGAATCTTTAACGGCCAAAAATGCAGCATACGGACCACCAAAGCCC 3503
Query 139500 ATAGGAATACCAAACCTTTGCATACTACCTACAGCAATATC 139540
|| |||| |||||| ||||| | ||||| ||||||||
Sbjct 3504 ATCGGAACACCAAATCTTTGGGCAGAACCTAGGGCAATATC 3544
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578991321744560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |