Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq14 244 1e-59
seq187 98.7 1e-15
seq290 84.2 3e-11
>seq14
Length=27313
Score = 244 bits (270), Expect = 1e-59
Identities = 1088/1705 (64%), Gaps = 31/1705 (2%)
Strand=Plus/Minus
Query 75242 GGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCA-AGG 75300
|| || ||||| || || ||| | || |||||| | || || |||||| | ||
Sbjct 18097 GGAATTCACGGTGATGATATTCCTAAAGTTTTGGAGTCGTATGATTTGATGTCGAAGAGA 18038
Query 75301 TATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTC 75360
|| |||| ||||| | ||||| | || ||||| ||||| ||| | || ||||||||
Sbjct 18037 TAC-TTCACACACGCCTCTCCAACATTGTTTAATGCCGGTACTCCACGCCCACAGATGTC 17979
Query 75361 CAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTAC 75420
||||||| | | || | ||||| ||||| || | |||||||| | ||| | |
Sbjct 17978 GTCTTGCTTCTTAGTTGCAATGAAGGATGACTCTATTGAAGGTATCTACGACACTTTGAA 17919
Query 75421 GGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAG 75480
||||||| || || ||| |||||| |||||||| | || || ||| | | |
Sbjct 17918 ACAGTGTGCCTTGATTTCCAAGACGGCTGGTGGTATTGGTCTACATATTCATAACATTCG 17859
Query 75481 AGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCT 75540
| | || ||| || || || ||| ||| ||||||||||||| ||| |
Sbjct 17858 TTCTACAGGTTCATACATTGCTGGTACCAACGGTACATCCAATGGTATTATTCCTATGGT 17799
Query 75541 TCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCGTCGCAAGGG-----G 75595
||| || || ||| || || | ||||| | |||| || | |||| | |
Sbjct 17798 TCGTGTGTTCAACAGTACTGCTAGGTATGTTGACCAAGGTGG---TAACAAGAGACCAGG 17742
Query 75596 T-CCATCGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACG 75654
| |||| || ||||||| ||||| |||||||| |||||| | || ||| | || | |
Sbjct 17741 TGCCATTGCTATCTACTTAGAACCTTGGCATGCAGATATCTTTGACTTCATCGATATCAG 17682
Query 75655 ACTCAACCAAGGTGACGAAGAGGCTCGGTGTA-GAGATCTCTTTTCATCCCTGTGGATTC 75713
|| || ||| | || ||| || ||| | | ||| | || || | || ||||| |
Sbjct 17681 GAAGAATCACGGTAAGGAGGAGA-TCCGTGCACGTGATTTGTTCCCAGCTCTTTGGATCC 17623
Query 75714 CAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACA 75773
| || || ||||||||||| ||||| | || | |||| || | || | |||
Sbjct 17622 CTGATCTATTCATGAAGCGTGTTGAACAAAATGATACATGGACTTTGTTTTCTCCTTCTG 17563
Query 75774 AGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATG 75833
|||| |||||||| || || | ||||| ||||||||| | ||||| || |
Sbjct 17562 AGGCCCCAGGTCTTTCAGATGTTTATGGTGACGAGTTTGAAAAGTTGTACACTCGTTACG 17503
Query 75834 AAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTC 75892
| ||||||| | | | || || || | | || ||| ||| | ||| |
Sbjct 17502 AGAAGGAGGGACGTGGAAGAAGAACCGT-TAAGGCTCAGAAGTTGTGGTATCAGATTTTG 17444
Query 75893 AAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAG 75952
| | ||||| || || || || || | ||| ||||||||||||| || |||| |||
Sbjct 17443 GAGGCTCAGACAGAAACCGGTACGCCTTTCATGATTTACAAGGATGCCTGCAACAGAAAG 17384
Query 75953 AGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAG 76012
||||| |||||||| |||||||| |||||| || ||| | ||| || || | |||
Sbjct 17383 AGTAATCAAAAGAACTTGGGAACCATCAAGTCTTCGAATTTGTGCTGTGAGGTTGTCGAG 17324
Query 76013 TACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTAT 76072
||| | | |||||| | ||| || || |||||| || | | || | |
Sbjct 17323 TACTCTTCTCCAGATGAGGTCGGTGTGTGTAACTTGGCAAACATTTGCTTGCCTGCATTT 17264
Query 76073 GTCAA---TGAAGAGACTCGCACTTTTG-----ATTATGAAAAACTTCATGAAATCACAA 76124
|| | || || | |||| ||| | | ||| || | || | ||||| |
Sbjct 17263 GTTGAGTCCGACAAGGAT--CACTGTTGGTTCAACTTTGAGAAGTTGCACAAGATCACCA 17206
Query 76125 AGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTT-GAGACT 76183
|| |||| || || | ||||| ||||||||||| |||| || || ||| |||
Sbjct 17205 AGGTTGTCACACGTAACTTGAACCGTGTCATTGACAGGAATTACTACCCAGTTCCAGA-G 17147
Query 76184 GCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGAT 76243
|| || || || || ||| || |||||||||| | | | |||||||||||||| ||||||
Sbjct 17146 GCCCGCAACTCCAACATGAGAAACAGACCTATCGCTCTTGGTGTTCAAGGTCTTGCGGAT 17087
Query 76244 GTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGT 76303
|| | || | | | ||||||| | ||||| ||| | || |
Sbjct 17086 ACGTTCTTCATGCTCAGATTGCCATTTGACTGCCCAGAAGCTCGTGAGCTTAACATACAG 17027
Query 76304 ATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAA 76363
|| || || ||| |||| || | | ||||||| | | | ||| | |
Sbjct 17026 ATATTCGAGACCTTGTACCATGGTGCTCTGGAGGAATCAAATCAGCTTTCTGTGGAAGAG 16967
Query 76364 GGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATG 76423
||| | || ||||| | || || ||||| || ||| | || | || |||| ||||||
Sbjct 16966 GGTACGTACGAGACCTACGAAGGCTCTCCAGCTTCCAAGGGTATTCTCCAGTACGATATG 16907
Query 76424 TGGGAAGGTGAAACCAAGCTCAAC--TACGACTGGGATGTTCTCAAGGAACGCATCAAGG 76481
| |||| ||| |||| || | | | || ||||| | | |||| |||
Sbjct 16906 T-GGAATAAGAAGCCAA-CTGATCTGTGGGATTGGGAGACTTTGAAGGCCAAGATCGCTA 16849
Query 76482 AGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAA 76541
|| | |||||| | || |||||| | || || |||||||| ||||| ||| | || |
Sbjct 16848 AGGATGGTCTTAGAAATTCGCTTTTGGTCGCTCCTATGCCAACTGCCTCTACCTCTCAGA 16789
Query 76542 TCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCC 76601
| ||||| | || || |||||||| |||| ||| | |||||||| | ||||||| |
Sbjct 16788 TTATGGGTTACAACGAGTGCTTTGAGCCATTCACCTCTAACATCTATCAGAGAAGAGTTC 16729
Query 76602 TCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTC 76661
| || |||||||| |||||||| || | | | ||||| | | || ||
Sbjct 16728 TTGCTGGTGAGTTCCAGATTGTCAATCCTTACATGCTAAGGGACCTTATTGATATGGGAA 16669
Query 76662 TCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCT 76721
| ||| | | | |||||| || |||| | | | ||| |||||||| || |
Sbjct 16668 TATGGAACGATGCAATGAAGAATTTCATCATTCATGACAATGGATCCATTCAGAACTTAC 16609
Query 76722 CAGATATCCCAGATGATATCAAGAATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAG 76781
| |||| ||||| | || ||||| | ||| | || || |||||| | ||||
Sbjct 16608 CTAATATTCCAGACAACATTAAGAAATTGTACAGGACTGTTTGGGAACTTTCTCAGAAAT 16549
Query 76782 ATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATC 76841
|||||| |||||||| || || | ||| || |||| || |||| |||||
Sbjct 16548 CTGTCATCGACATGGCTGCCGACAGAGGTGCCTACATTTGCCAGTCTCAATCCATGAACA 16489
Query 76842 TATTCATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAAC 76901
| | || || ||||| ||| ||| | | || ||||| | |||| |||||
Sbjct 16488 TCCACTTGCAATCGCCAACTATGGGTAAGTTGACGTCCATGCACTTTTACGGCTGGAAGA 16429
Query 76902 AGGGGCTCAAAACCGGAATGTACTA 76926
|||| | || || || ||||||||
Sbjct 16428 AGGGTTTGAAGACAGGTATGTACTA 16404
>seq187
Length=11729
Score = 98.7 bits (108), Expect = 1e-15
Identities = 291/442 (66%), Gaps = 10/442 (2%)
Strand=Plus/Plus
Query 75608 TACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTT-ACGACTCAACCAAGG 75666
|| ||||| || |||||||| || |||||||| ||||| || || | || ||||| ||
Sbjct 2179 TATTTGGAGCCGTGGCATGCAGACATCATGGAATTCCTCGATTTGAAGAAA-AACCACGG 2237
Query 75667 TGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCAT 75726
| || ||| ||| | ||||| || | | |||||||||| ||| | |||||
Sbjct 2238 CAAGGAGGAGATGCGGGCCCGGGATCTATTCTATGCATTGTGGATTCCCGACTTGTTCAT 2297
Query 75727 GAAGCGGGTTGAGGAGGGT--GGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGT 75784
| |||||| ||| ||| ||| ||| |||||||| |||| ||| || ||
Sbjct 2298 GCGGCGGGTCGAGAAGGACCAGGTG--TGGAGTCTTTTCTCCGAGGACACGGCCCCGGGG 2355
Query 75785 CTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGT 75844
| || ||| | ||| | ||||| || | || ||| | || || | |||||
Sbjct 2356 TTGTCGGACACATGGGGGGCCGAGTTCGAGTCTCTGTACGAGCAATACGAGCAAGAGGGC 2415
Query 75845 AG--AGCCAATGCGACTGTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGA 75902
| | | || || || | ||| | || ||| || ||| | | || ||||
Sbjct 2416 CGGTACCTAAGGCAGGTGAAG--GCCCGTAAGGTCTGGGAGAGGATTGTGTACTCGCAGA 2473
Query 75903 CGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAA 75962
|||||||||| ||||| | |||||| ||||| ||||| || ||| ||| | ||||| |
Sbjct 2474 CGGAGACTGGGACACCGTTTATGCTCTACAAAGATGCGTGCAACGCGAAATGCAACCAGA 2533
Query 75963 AGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATA 76022
|||| | || || |||||| || ||||| ||| || | | |||||| | |
Sbjct 2534 AGAACCTCGGCACGATCAAGTCGTCGAATCTCTGCTGCGAGGTGGTCGAGTACTCGTGCA 2593
Query 76023 AGGATGAGACGGCTGTTTGCAA 76044
||||||||| || || |||||
Sbjct 2594 AGGATGAGATCGCGGTGTGCAA 2615
>seq290
Length=58723
Score = 84.2 bits (92), Expect = 3e-11
Identities = 278/422 (66%), Gaps = 18/422 (4%)
Strand=Plus/Minus
Query 65104 GAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTC 65163
|||||| | |||||||| || || || | |||| | |||||||||||| | ||| |
Sbjct 53215 GAGGGTGTTTTCTTCTCTGGCTCGTTTGCCTCTATCTTCTGGTTGAAGAAGAGAGGTTTG 53156
Query 65164 ATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAG 65223
||||| || || |||||| ||||| ||||||| | | ||||||||||| || ||
Sbjct 53155 ATGCCTGGACTTACCTTCTCCAATGAGCTTATTTGCAGGGATGAGGGTCTACATACTGAT 53096
Query 65224 TTTGC---CGTGGAGCTCT-TCAAGACTTTGCGTAATAGACCCACTACCGAAACTATCCA 65279
|| || | | | ||| ||| |||| || ||| | || | | ||| |
Sbjct 53095 TTCGCATGCCTCTTGTTCTCTCA----TTTGAAGCATCCACCTAGTAAGGTTATTATTAA 53040
Query 65280 CGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGTTCATCTTG---GACGCACTCCC 65336
|| ||| ||||| || | |||||| ||| || ||| | || || |||||
Sbjct 53039 GAAAATTATGACCGAGGCTGTCAATATTGAG-AAGACTT--TCTGGAGTGATGCTCTCCC 52983
Query 65337 ATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGTACATTG-AGTATGTGTCGG 65395
| | | | | |||||||||| || | |||| || | || ||| | | |||| | |
Sbjct 52982 AGTTTCTTTGCTTGGTATGAACTTCGATATGATGGCCCATTATGTTGAATTCTGTG-CCG 52924
Query 65396 ATCGTCTCCTCAAACAAGTTGGGGTGCCACCCA-TTTGGAACGCGAAGAATCCATTTGAC 65454
| | | || | ||||| || | | ||| || || | |||||||| |||
Sbjct 52923 ACAGATTGCT-TATTGCTTTGGGATGTGAGAAAGTTTACAATGCTACCAATCCATTCGAC 52865
Query 65455 TTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGAC 65514
|||||||| |||||| | | | ||| ||||| ||||||||||||||| ||||| |||
Sbjct 52864 TTTATGGAGAACATTTCCTTGGCTGGTAAGACTAACTTCTTTGAGAAGAGAGTTTCTGAC 52805
Query 65515 TA 65516
||
Sbjct 52804 TA 52803
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596562306936640
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