Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq14 210 6e-49 seq143 129 2e-24 >seq14 Length=27313 Score = 210 bits (232), Expect = 6e-49 Identities = 585/894 (65%), Gaps = 5/894 (1%) Strand=Plus/Plus Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689 ||| || |||| ||||||||||| || ||| ||||||||| || || ||||| || || Sbjct 17321 GTACTCGACAACCTCACAGCACAAATTCGAAGACTTGATGGTTCCCAAGTTCTTTTGATT 17380 Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749 | || ||||| || ||||||||||| | ||| | || || || || || |||| || Sbjct 17381 ACTCTTTCTGTTGCAGGCATCCTTGTAAATCATGAAAGGCGTACCGGTTTCTGTCTGAGC 17440 Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATT-TGCTTGTTGTATCTGCCTTCCG 155808 |||| ||||| ||| | | | || |||| | ||| || | | ||| || Sbjct 17441 CTCCAAAATCTGATACCACAACTTCTGAGCCTTAACGGTTCTTCTTCCACGTCCCT-CCT 17499 Query 155809 ACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGC 155868 ||| || | |||| | || | || ||||| ||| ||| || || ||| Sbjct 17500 TCTCGTAACGAGTGTACAACTTTTCAAACTCGTCACCATAAACATCTGAAAGACCTGGGG 17559 Query 155869 ACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACAT 155928 || | || |||||| | ||| | | ||| ||||||| ||| |||| || Sbjct 17560 CCTCAGAAGGAGAAAACAAAGTCCATGTATCATTTTGTTCAACACGCTTCATGAATAGAT 17619 Query 155929 CACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCT 155988 || ||||| ||| ||| | || | ||| |||||| | |||||||||| Sbjct 17620 CAGGGATCCAAAGAGCTGGGAACAAATCACGTGCACGGATCTCCTCCTTACCGTGATTCT 17679 Query 155989 TCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAAC 156048 ||| | || | ||| || ||||| | ||| || || | || ||||||| Sbjct 17680 TCCTGATATCGATGAAGTCAAAGATATCTGCATGCCAAGGTTCTAAGTAGATAGCAATGG 17739 Query 156049 TACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTA 156105 ||| |||||| ||||| || || ||||||| |||||| | ||||| |||| | Sbjct 17740 CACCTGGTCTCTTGTTACCACCTTGGTCAACATACCTAGCAGTACTGTTGAACACACGAA 17799 Query 156106 GCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGC 156165 ||||||||||||||||||||| || || ||||| || ||| | ||||| | || | Sbjct 17800 CCATAGGAATAATACCATTGGATGTACCGTTGGTACCAGCAATGTATGAACCTGTAGAAC 17859 Query 156166 GAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCT 156225 ||| |||||||||||||| ||||||||||| | | || ||||| || || | | Sbjct 17860 GAATGTTATGAATATGTAGACCAATACCACCAGCCGTCTTGGAAATCAAGGCACACTGTT 17919 Query 156226 TTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAAC 156285 | | ||| | | | |||||||||||||| ||||| | ||||| | || |||| || Sbjct 17920 TCAAAGTGTCGTAGATACCTTCAATAGAGTCATCCTTCATTGCAACTAAGAAGCAAGACG 17979 Query 156286 TTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACT 156345 | || || ||||| || || || || || | ||| || | || || | || || Sbjct 17980 ACATCTGTGGGCGTGGAGTACCGGCATTAAACAATGTTGGAGAGGCGTGTGTGAAGTATC 18039 Query 156346 TATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGA 156405 | || ||||| |||| || | |||| || || || || | |||||||| | | Sbjct 18040 TCTTCGACATCAAATCATACGACTCCAAAACTTTAGGAATATCATCACCGTGAATTCCAA 18099 Query 156406 TAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAA 156465 | || ||||| | ||||||||| | |||| ||| | |||| || | || | Sbjct 18100 CGGCAACTCTCATAAGAAGATGCTGAGGCCTCTCTGCAACCTTACCATTTATCCTCAACA 18159 Query 156466 GGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACGGT 156519 | |||| || || || || ||||| || || || | | | |||||||||| Sbjct 18160 GATATGAACGCTCTAGGGTCTTAAAGCCAAAGTAGTTATAGCTGAAATCACGGT 18213 >seq143 Length=14256 Score = 129 bits (142), Expect = 2e-24 Identities = 224/321 (70%), Gaps = 6/321 (2%) Strand=Plus/Plus Query 289027 TTACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATT 289086 ||||||| ||| |||||||| |||| ||||| | | | |||| ||| | ||| || | Sbjct 1857 TTACCAATAGCGTCAATTTCATCAACGAAAACAATAGATGGAGCATTCTCTCTTGCCGTG 1916 Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146 | ||||| || | || | || || |||| ||| ||| ||||||| |||||||||||| Sbjct 1917 GTGAATAACTCACGAACTCTCGAAGCACCAACACCGACAAACATTTCGACAAATTCAGAA 1976 Query 289147 GCGGATACTTGAAT-GAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGT 289205 | || || |||| ||| | || || ||||| |||||| ||| | || | | || Sbjct 1977 CCTGAAAC-AGAATAGAACGGAACCTTGGCTTCACCTGCTGTTGCACGTGCTAATAACGT 2035 Query 289206 CTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGA 289265 ||||| || || |||||||| ||||| | || ||||| ||| || || || Sbjct 2036 TTTACCCGTACCTGGTGGTCCGCATAATATTGCACCACGTGGTATTTTAGCTCC--CAAT 2093 Query 289266 CTT--ATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCC 289323 ||| |||| | | || |||||| || | |||| |||| || ||| | |||||| Sbjct 2094 CTTTCATATCTTTGTGGATCCTTTAAGAAGTTGACAAATTCCAAAATTTCTTCCTTTGCC 2153 Query 289324 TCATCACATCCTGCTACATCA 289344 |||||||| || || |||||| Sbjct 2154 TCATCACAACCAGCGACATCA 2174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471799157205586