Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq14 210 6e-49
seq143 129 2e-24
>seq14
Length=27313
Score = 210 bits (232), Expect = 6e-49
Identities = 585/894 (65%), Gaps = 5/894 (1%)
Strand=Plus/Plus
Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689
||| || |||| ||||||||||| || ||| ||||||||| || || ||||| || ||
Sbjct 17321 GTACTCGACAACCTCACAGCACAAATTCGAAGACTTGATGGTTCCCAAGTTCTTTTGATT 17380
Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749
| || ||||| || ||||||||||| | ||| | || || || || || |||| ||
Sbjct 17381 ACTCTTTCTGTTGCAGGCATCCTTGTAAATCATGAAAGGCGTACCGGTTTCTGTCTGAGC 17440
Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATT-TGCTTGTTGTATCTGCCTTCCG 155808
|||| ||||| ||| | | | || |||| | ||| || | | ||| ||
Sbjct 17441 CTCCAAAATCTGATACCACAACTTCTGAGCCTTAACGGTTCTTCTTCCACGTCCCT-CCT 17499
Query 155809 ACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGC 155868
||| || | |||| | || | || ||||| ||| ||| || || |||
Sbjct 17500 TCTCGTAACGAGTGTACAACTTTTCAAACTCGTCACCATAAACATCTGAAAGACCTGGGG 17559
Query 155869 ACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACAT 155928
|| | || |||||| | ||| | | ||| ||||||| ||| |||| ||
Sbjct 17560 CCTCAGAAGGAGAAAACAAAGTCCATGTATCATTTTGTTCAACACGCTTCATGAATAGAT 17619
Query 155929 CACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCT 155988
|| ||||| ||| ||| | || | ||| |||||| | ||||||||||
Sbjct 17620 CAGGGATCCAAAGAGCTGGGAACAAATCACGTGCACGGATCTCCTCCTTACCGTGATTCT 17679
Query 155989 TCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAAC 156048
||| | || | ||| || ||||| | ||| || || | || |||||||
Sbjct 17680 TCCTGATATCGATGAAGTCAAAGATATCTGCATGCCAAGGTTCTAAGTAGATAGCAATGG 17739
Query 156049 TACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTA 156105
||| |||||| ||||| || || ||||||| |||||| | ||||| |||| |
Sbjct 17740 CACCTGGTCTCTTGTTACCACCTTGGTCAACATACCTAGCAGTACTGTTGAACACACGAA 17799
Query 156106 GCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGC 156165
||||||||||||||||||||| || || ||||| || ||| | ||||| | || |
Sbjct 17800 CCATAGGAATAATACCATTGGATGTACCGTTGGTACCAGCAATGTATGAACCTGTAGAAC 17859
Query 156166 GAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCT 156225
||| |||||||||||||| ||||||||||| | | || ||||| || || | |
Sbjct 17860 GAATGTTATGAATATGTAGACCAATACCACCAGCCGTCTTGGAAATCAAGGCACACTGTT 17919
Query 156226 TTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAAC 156285
| | ||| | | | |||||||||||||| ||||| | ||||| | || |||| ||
Sbjct 17920 TCAAAGTGTCGTAGATACCTTCAATAGAGTCATCCTTCATTGCAACTAAGAAGCAAGACG 17979
Query 156286 TTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACT 156345
| || || ||||| || || || || || | ||| || | || || | || ||
Sbjct 17980 ACATCTGTGGGCGTGGAGTACCGGCATTAAACAATGTTGGAGAGGCGTGTGTGAAGTATC 18039
Query 156346 TATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGA 156405
| || ||||| |||| || | |||| || || || || | |||||||| | |
Sbjct 18040 TCTTCGACATCAAATCATACGACTCCAAAACTTTAGGAATATCATCACCGTGAATTCCAA 18099
Query 156406 TAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAA 156465
| || ||||| | ||||||||| | |||| ||| | |||| || | || |
Sbjct 18100 CGGCAACTCTCATAAGAAGATGCTGAGGCCTCTCTGCAACCTTACCATTTATCCTCAACA 18159
Query 156466 GGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACGGT 156519
| |||| || || || || ||||| || || || | | | ||||||||||
Sbjct 18160 GATATGAACGCTCTAGGGTCTTAAAGCCAAAGTAGTTATAGCTGAAATCACGGT 18213
>seq143
Length=14256
Score = 129 bits (142), Expect = 2e-24
Identities = 224/321 (70%), Gaps = 6/321 (2%)
Strand=Plus/Plus
Query 289027 TTACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATT 289086
||||||| ||| |||||||| |||| ||||| | | | |||| ||| | ||| || |
Sbjct 1857 TTACCAATAGCGTCAATTTCATCAACGAAAACAATAGATGGAGCATTCTCTCTTGCCGTG 1916
Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146
| ||||| || | || | || || |||| ||| ||| ||||||| ||||||||||||
Sbjct 1917 GTGAATAACTCACGAACTCTCGAAGCACCAACACCGACAAACATTTCGACAAATTCAGAA 1976
Query 289147 GCGGATACTTGAAT-GAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGT 289205
| || || |||| ||| | || || ||||| |||||| ||| | || | | ||
Sbjct 1977 CCTGAAAC-AGAATAGAACGGAACCTTGGCTTCACCTGCTGTTGCACGTGCTAATAACGT 2035
Query 289206 CTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGA 289265
||||| || || |||||||| ||||| | || ||||| ||| || || ||
Sbjct 2036 TTTACCCGTACCTGGTGGTCCGCATAATATTGCACCACGTGGTATTTTAGCTCC--CAAT 2093
Query 289266 CTT--ATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCC 289323
||| |||| | | || |||||| || | |||| |||| || ||| | ||||||
Sbjct 2094 CTTTCATATCTTTGTGGATCCTTTAAGAAGTTGACAAATTCCAAAATTTCTTCCTTTGCC 2153
Query 289324 TCATCACATCCTGCTACATCA 289344
|||||||| || || ||||||
Sbjct 2154 TCATCACAACCAGCGACATCA 2174
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471799157205586
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |