Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq187 122 1e-21
>seq187
Length=11729
Score = 122 bits (134), Expect = 1e-21
Identities = 324/489 (66%), Gaps = 12/489 (2%)
Strand=Plus/Minus
Query 1626990 GGTAAACTGGATGGCGTCGGCGGCGGGCCTGGTGCGCAGATAGTACATGCCGGTCTTGAG 1627049
||| |||| |||||| | || ||||| | ||| | || ||||||||||||||||| |
Sbjct 3620 GGTGAACTTGATGGCCTGGGAGGCGGCCTGGGTCCTCAAGTAGTACATGCCGGTCTTCAA 3561
Query 1627050 GCCGCGGCGCCACGCGTAGGCGTGCATCGACGTGATGCGCTCGGGCGTCGCGTCGGCGCA 1627109
||| | |||| || ||| |||||| || || || |||| ||| |
Sbjct 3560 GCCCTTGTGCCAGGCATAGAAGTGCATGCTGGTCATCTTGGCGAGCGTGCAGTCCTTGAG 3501
Query 1627110 GTACAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGATCGGCCGCCATGTCGAT 1627169
| | ||||| | ||| ||||| || ||||| || || ||||| |||||||| ||
Sbjct 3500 GAAGAGGTTCATGCTCTGTGATTGGTCAACGTAGGGAGCACGGTCGGCAGCCATGTCAAT 3441
Query 1627170 GGTGACCCGGTTGGGCACCTCCCACACGGTCTTGAAGATGGCCTTGAGGTCGGGCGGCAC 1627229
| ||| | | | || ||||| ||||||||| ||| ||| | || | |
Sbjct 3440 GATGATCTTCTGCGACATGTCCCAGACGGTCTTGTAGAG----TTGT--TTGGTATGTTC 3387
Query 1627230 CTCGTCGTCGCCAAAGCCCTGCACCGAGCCGTGCGCCGCGACGAGCCTGTCGCGAAAGTC 1627289
| | | || | | | |||| | ||||||| || |||| | | ||| | ||
Sbjct 3386 CGGGATGCCGGCTATGTCCTGGATGGAGCCGTTTGCGGCGATAATCTGGTCCTTCATGTG 3327
Query 1627290 GGGCGTCCACAGGCCGCGCGCCATCAGGCGCTT-GACCAGGTGGCGGTTGACCAC--GGT 1627346
| |||||||||| | | || | | | ||| || | |||||| || |||
Sbjct 3326 TGCATTCCACAGGCCCAGA-CGGTCTAGATCATCGACGAGATACGAGTTGACTACCTGGT 3268
Query 1627347 AAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTGATGACCTCGCACGCCTC 1627406
||||| ||||| || | ||||||||||||||| |||||| |||| | |||
Sbjct 3267 GC--TCGCCAGAGAGAACTCTTCGCGTGTAGATGTTGGAAGTGATGGGCTCGAAGCACTC 3210
Query 1627407 GGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAGGAGCGAGTT 1627466
||| |||||||||||||| |||| |||||||||||||| ||||| | |||||||||
Sbjct 3209 CGTGAACCCCAGGATCTGCGAGGTCGATGCCGTGGGCATGAGGGCCACCAAGAGCGAGTT 3150
Query 1627467 GCGCAGGCC 1627475
||| |||||
Sbjct 3149 GCGGAGGCC 3141
Score = 96.9 bits (106), Expect = 4e-14
Identities = 180/262 (69%), Gaps = 2/262 (1%)
Strand=Plus/Minus
Query 1630062 GCACTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTT 1630121
|| |||||| || || || ||| ||| || || |||||||| || || | |||| |
Sbjct 2148 GCCCTGGTCCACATACTTGGCAGTGCTGTTGAACACCCGGAGCATCGGAACTATGCCGCT 2089
Query 1630122 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTG-TGCGCGGCAA 1630180
||| ||||||||||||| | ||| | ||||| || || || || || | |||
Sbjct 2088 GGATGTCCCGTTGGTGCCCGAAATGTACGTTCCGGCCGCCCGAACGTTACTGAGGTGCAT 2029
Query 1630181 AGCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGC 1630240
||||| || || || | || ||||| | ||| ||| | | ||| | |||| |
Sbjct 2028 T-CCGATTCCACCCGCGGCTTTCGAGATCATCGCACACCCGTGCACCGTCCGGAAGATCC 1970
Query 1630241 CCTCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCG 1630300
| || | ||||||| || || | |||| || |||||||||||| | |||| | |||
Sbjct 1969 CGTCCAACGAGTCGCTCTGCAAGCCCACCAGGAAGCACGACGAGAGGTTCGGGAACTCCG 1910
Query 1630301 TGCCGGCGTTGAAGAGCGTGGG 1630322
| || |||||||| | ||||||
Sbjct 1909 TTCCTGCGTTGAACAACGTGGG 1888
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107058940740026
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |