Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq187 122 1e-21 >seq187 Length=11729 Score = 122 bits (134), Expect = 1e-21 Identities = 324/489 (66%), Gaps = 12/489 (2%) Strand=Plus/Minus Query 1626990 GGTAAACTGGATGGCGTCGGCGGCGGGCCTGGTGCGCAGATAGTACATGCCGGTCTTGAG 1627049 ||| |||| |||||| | || ||||| | ||| | || ||||||||||||||||| | Sbjct 3620 GGTGAACTTGATGGCCTGGGAGGCGGCCTGGGTCCTCAAGTAGTACATGCCGGTCTTCAA 3561 Query 1627050 GCCGCGGCGCCACGCGTAGGCGTGCATCGACGTGATGCGCTCGGGCGTCGCGTCGGCGCA 1627109 ||| | |||| || ||| |||||| || || || |||| ||| | Sbjct 3560 GCCCTTGTGCCAGGCATAGAAGTGCATGCTGGTCATCTTGGCGAGCGTGCAGTCCTTGAG 3501 Query 1627110 GTACAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGATCGGCCGCCATGTCGAT 1627169 | | ||||| | ||| ||||| || ||||| || || ||||| |||||||| || Sbjct 3500 GAAGAGGTTCATGCTCTGTGATTGGTCAACGTAGGGAGCACGGTCGGCAGCCATGTCAAT 3441 Query 1627170 GGTGACCCGGTTGGGCACCTCCCACACGGTCTTGAAGATGGCCTTGAGGTCGGGCGGCAC 1627229 | ||| | | | || ||||| ||||||||| ||| ||| | || | | Sbjct 3440 GATGATCTTCTGCGACATGTCCCAGACGGTCTTGTAGAG----TTGT--TTGGTATGTTC 3387 Query 1627230 CTCGTCGTCGCCAAAGCCCTGCACCGAGCCGTGCGCCGCGACGAGCCTGTCGCGAAAGTC 1627289 | | | || | | | |||| | ||||||| || |||| | | ||| | || Sbjct 3386 CGGGATGCCGGCTATGTCCTGGATGGAGCCGTTTGCGGCGATAATCTGGTCCTTCATGTG 3327 Query 1627290 GGGCGTCCACAGGCCGCGCGCCATCAGGCGCTT-GACCAGGTGGCGGTTGACCAC--GGT 1627346 | |||||||||| | | || | | | ||| || | |||||| || ||| Sbjct 3326 TGCATTCCACAGGCCCAGA-CGGTCTAGATCATCGACGAGATACGAGTTGACTACCTGGT 3268 Query 1627347 AAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTGATGACCTCGCACGCCTC 1627406 ||||| ||||| || | ||||||||||||||| |||||| |||| | ||| Sbjct 3267 GC--TCGCCAGAGAGAACTCTTCGCGTGTAGATGTTGGAAGTGATGGGCTCGAAGCACTC 3210 Query 1627407 GGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAGGAGCGAGTT 1627466 ||| |||||||||||||| |||| |||||||||||||| ||||| | ||||||||| Sbjct 3209 CGTGAACCCCAGGATCTGCGAGGTCGATGCCGTGGGCATGAGGGCCACCAAGAGCGAGTT 3150 Query 1627467 GCGCAGGCC 1627475 ||| ||||| Sbjct 3149 GCGGAGGCC 3141 Score = 96.9 bits (106), Expect = 4e-14 Identities = 180/262 (69%), Gaps = 2/262 (1%) Strand=Plus/Minus Query 1630062 GCACTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTT 1630121 || |||||| || || || ||| ||| || || |||||||| || || | |||| | Sbjct 2148 GCCCTGGTCCACATACTTGGCAGTGCTGTTGAACACCCGGAGCATCGGAACTATGCCGCT 2089 Query 1630122 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTG-TGCGCGGCAA 1630180 ||| ||||||||||||| | ||| | ||||| || || || || || | ||| Sbjct 2088 GGATGTCCCGTTGGTGCCCGAAATGTACGTTCCGGCCGCCCGAACGTTACTGAGGTGCAT 2029 Query 1630181 AGCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGC 1630240 ||||| || || || | || ||||| | ||| ||| | | ||| | |||| | Sbjct 2028 T-CCGATTCCACCCGCGGCTTTCGAGATCATCGCACACCCGTGCACCGTCCGGAAGATCC 1970 Query 1630241 CCTCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCG 1630300 | || | ||||||| || || | |||| || |||||||||||| | |||| | ||| Sbjct 1969 CGTCCAACGAGTCGCTCTGCAAGCCCACCAGGAAGCACGACGAGAGGTTCGGGAACTCCG 1910 Query 1630301 TGCCGGCGTTGAAGAGCGTGGG 1630322 | || |||||||| | |||||| Sbjct 1909 TTCCTGCGTTGAACAACGTGGG 1888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107058940740026