Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq423 143 2e-29 seq208 136 4e-27 >seq423 Length=50725 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || |||| || | |||||||| || || || || || || || | || Sbjct 3823 ATGCAAATTTTCGTTAAGACTTTGACCGGTAAGACCATCACCCTTGAGGTTGAGTCTTCC 3764 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || |||||||||||||||||||| || ||||| || || ||||| Sbjct 3763 GACACTATTGACAATGTCAAACAAAAGATCCAAGACAAGGAGGGAATTCCACCTGATCAG 3704 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||||||||| || || ||| ||||||| |||| |||| || || ||| Sbjct 3703 CAGAGATTGATCTTTGCTGGTAAGCAGTTGGAGGACGGCAGAACTTTGTCTGACTACAAC 3644 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| ||||| || || || |||||||| ||| ||||| | || || Sbjct 3643 ATTCAGAAGGAGTCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGG 3597 >seq208 Length=10633 Score = 136 bits (150), Expect = 4e-27 Identities = 174/240 (73%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || |||| || | || ||||| ||||| || | || || || | | Sbjct 9678 ATGCAAATTTTCGTTAAGACCTTGACGGGTAAGACTATCACCTTGGAGGTGGAGTCTTCA 9619 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||||| || || || ||||| || || ||||| Sbjct 9618 GACACCATTGACAATGTCAAGCAAAAGATCCAGGATAAGGAGGGAATCCCACCTGATCAG 9559 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||||||| || ||| |||||||| |||| |||| || || ||| Sbjct 9558 CAGAGATTGATCTTTGCCGGTAAGCAGTTGGAGGATGGCAGAACTTTGTCTGACTACAAC 9499 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGCCA 24943 || |||||||| || || || |||||||| ||| ||||| | ||||| | ||||||| Sbjct 9498 ATCCAAAAGGAGTCAACTCTTCACTTGGTCTTGAGATTGAGAGGAGGTATCATTGAGCCA 9439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449892100001840