Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq187 111 2e-18
seq65 93.3 7e-13
seq112 87.8 3e-11
>seq187
Length=11729
Score = 111 bits (122), Expect = 2e-18
Identities = 323/492 (66%), Gaps = 18/492 (4%)
Strand=Plus/Minus
Query 2069259 GGTAAACTGGATGGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCCGGTCTTGAG 2069318
||| |||| |||||| | || ||| | | |||| | || ||||||||||||||||| |
Sbjct 3620 GGTGAACTTGATGGCCTGGGAGGCGGCCTGGGTCCTCAAGTAGTACATGCCGGTCTTCAA 3561
Query 2069319 GCCGCGACGCCACGCGTAGGCGTGCATCGACGTGATGGACTCGGCATTCGGGACGGCACA 2069378
||| |||| || ||| |||||| || || || ||| || | | |
Sbjct 3560 GCCCTTGTGCCAGGCATAGAAGTGCATGCTGGTCAT---CTTGGCGAGCGTGCAGTCCTT 3504
Query 2069379 GT---AGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCGGCCGCCATGTC 2069435
| ||||||| | ||| ||||| || ||||| || |||||||| ||||||||
Sbjct 3503 GAGGAAGAGGTTCATGCTCTGTGATTGGTCAACGTAGGGAGCACGGTCGGCAGCCATGTC 3444
Query 2069436 GATGGTCACGCGGTTGGACACCTCCCACACGGTCTTGAACAGGGCCTTGAGATGCGGCGG 2069495
||| | | | |||| ||||| ||||||||| | || ||| ||| |||
Sbjct 3443 AATGATGATCTTCTGCGACATGTCCCAGACGGTCTTGTAGAGTTGTTTGGTATGTTCCGG 3384
Query 2069496 CACCTCGTCGTCATCAAAGCCCTGCACCGAGCCCTGCGCTGCGATGAGGCGGTCGCGAAA 2069555
| || | | | |||| | ||||| | || ||||| | |||| |
Sbjct 3383 GATGCCGGCT------ATGTCCTGGATGGAGCCGTTTGCGGCGATAATCTGGTCCTTCAT 3330
Query 2069556 GTCGGGCGTCCACAGGCCGCGCGCCATCATGCGC-TCGACCAGGTGGCGGTTGACCAC-- 2069612
|| | |||||||||| | | || | | ||||| || | |||||| ||
Sbjct 3329 GTGTGCATTCCACAGGCCCAGA-CGGTCTAGATCATCGACGAGATACGAGTTGACTACCT 3271
Query 2069613 GGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGATGACCTCGCACGC 2069672
||| ||||| ||||| || | ||||||||||||||| |||||| |||| |
Sbjct 3270 GGTGC--TCGCCAGAGAGAACTCTTCGCGTGTAGATGTTGGAAGTGATGGGCTCGAAGCA 3213
Query 2069673 CTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAGCAGCGA 2069732
||| ||| |||||||||||||| |||| |||||||||||||| ||||| | |||||
Sbjct 3212 CTCCGTGAACCCCAGGATCTGCGAGGTCGATGCCGTGGGCATGAGGGCCACCAAGAGCGA 3153
Query 2069733 GTTGCGCAGGCC 2069744
|||||| |||||
Sbjct 3152 GTTGCGGAGGCC 3141
Score = 100 bits (110), Expect = 5e-15
Identities = 181/262 (69%), Gaps = 2/262 (1%)
Strand=Plus/Minus
Query 2073537 GCACTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTT 2073596
|| |||||| ||||| || ||| ||| || || |||||||| || || | |||| |
Sbjct 2148 GCCCTGGTCCACATACTTGGCAGTGCTGTTGAACACCCGGAGCATCGGAACTATGCCGCT 2089
Query 2073597 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTG-TGCGCGGCAA 2073655
||| ||||||||||||| | ||| | || | || || || || || | |||
Sbjct 2088 GGATGTCCCGTTGGTGCCCGAAATGTACGTTCCGGCCGCCCGAACGTTACTGAGGTGCAT 2029
Query 2073656 AGCCGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGC 2073715
||||| || || || || || ||||| | ||| ||| | || |||| | |||| |
Sbjct 2028 T-CCGATTCCACCCGCGGCTTTCGAGATCATCGCACACCCGTGCACCGTCCGGAAGATCC 1970
Query 2073716 CCTCGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCG 2073775
| || | ||||||| || || | ||| ||| |||||||||||| | |||| | |||
Sbjct 1969 CGTCCAACGAGTCGCTCTGCAAGCCCACCAGGAAGCACGACGAGAGGTTCGGGAACTCCG 1910
Query 2073776 TGCCGGCATTGAAGAGCGTGGG 2073797
| || || ||||| | ||||||
Sbjct 1909 TTCCTGCGTTGAACAACGTGGG 1888
Score = 89.7 bits (98), Expect = 8e-12
Identities = 94/124 (76%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 2071852 ACGCGGCGCATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTC 2071911
|| || ||||| |||| |||| |||||| | || || ||||| || ||||| ||
Sbjct 2306 ACCCGCCGCATGAACAAGTCGGGAATCCACAATGCATAGAATAGATCCCGGGCCCGCATC 2247
Query 2071912 TCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGC 2071971
||||||||||||||||| || |||| ||||| | || | || ||| || |||||||||
Sbjct 2246 TCCTCCTTGCCGTGGTTTTTCTTCAAATCGAGGAATTCCATGATGTCTGCATGCCACGGC 2187
Query 2071972 TCCA 2071975
||||
Sbjct 2186 TCCA 2183
>seq65
Length=19570
Score = 93.3 bits (102), Expect = 7e-13
Identities = 132/183 (72%), Gaps = 6/183 (3%)
Strand=Plus/Plus
Query 429633 ACCTTCCGGCTCAACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGACGGCGACGAG 429692
|| |||||| ||||| || |||| || | |||||||| || || ||||| ||||||
Sbjct 14489 ACGTTCCGGATCAACTTGTCCGTCACCACTCCTTACAACGCTGATTTCGACGGTGACGAG 14548
Query 429693 ATGAACCTGCACGTGCCCCAGTCG---GAGATGGCACGCGCCGAAGTCGCCCACACCATG 429749
|||||| |||||||||| |||||| |||| | | | || ||| ||| | | |
Sbjct 14549 ATGAACATGCACGTGCCACAGTCGTACGAGACG--AAG-GCGGAACTCGAGGAGATCTGT 14605
Query 429750 GGCGTGGCCCTCAAGGCCGTGTCGCCGCAGGCCAACAAGCCCATCATCGGGCTCGTGATG 429809
| |||| ||| || |||||| |||||| ||||||||||| |||| || | ||| |
Sbjct 14606 GCCGTGCCCCGGCAGATCGTGTCACCGCAGTCCAACAAGCCCGTCATGGGCATTGTGCAG 14665
Query 429810 GAC 429812
|||
Sbjct 14666 GAC 14668
>seq112
Length=141941
Score = 87.8 bits (96), Expect = 3e-11
Identities = 166/242 (69%), Gaps = 2/242 (1%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||| || || || ||||||| || || ||||| ||| | |||| ||| || |||
Sbjct 11768 TGTACTTAGTAACAGCTCTGGTACCTTCAGAAACGGCATGCTTAGCCAATTCACCTGGCA 11709
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
||||| | || || ||||||||||| | || | || ||| |||||| ||
Sbjct 11708 AGATCAATCTGACAGCAGTCTGGATCTCTCTGGCGGAAATGGTGGACTTCTTGTT-GTAA 11650
Query 1485590 GC-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648
|| |||| | ||||| | | | || | |||| || ||||| || || ||||||
Sbjct 11649 GCAGCCAACTTGGAAGCCTCAGAGGCAATTCTCTCGAAAATATCGTTAACGAAAGAGTTC 11590
Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
||||| ||||| | | | | ||||| || ||| ||||| ||||| | |||||||
Sbjct 11589 ATGATAGACATGGCTCTTCTAGAGATACCAGTGTCCGGGTGAGTTTGCTTCAACACCTTG 11530
Query 1485709 TA 1485710
||
Sbjct 11529 TA 11528
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916142365679342
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |