Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq423 156 8e-33 seq208 145 1e-29 >seq423 Length=50725 Score = 156 bits (172), Expect = 8e-33 Identities = 176/236 (75%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||||||| | || ||| ||||| ||||| || || ||||| || || || |||| Sbjct 3595 TACCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAG 3654 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | | |||| ||||| || | || || ||||||||||| | ||| || ||||| || | Sbjct 3655 ACAAAGTTCTGCCGTCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTG 3714 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | ||||| ||||| ||||| |||||| ||| ||||| ||||| || || || || | Sbjct 3715 GAATTCCCTCCTTGTCTTGGATCTTTTGTTTGACATTGTCAATAGTGTCGGAAGACTCAA 3774 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATTATA 82817 | || | || || ||||| || ||||| ||||| || || || |||||| | ||| Sbjct 3775 CCTCAAGGGTGATGGTCTTACCGGTCAAAGTCTTAACGAAAATTTGCATTTTGATA 3830 >seq208 Length=10633 Score = 145 bits (160), Expect = 1e-29 Identities = 172/233 (74%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 ||||||||||||| | || || ||||| ||||| || || || || || || || |||| Sbjct 9450 TACCTCCTCTCAATCTCAAGACCAAGTGAAGAGTTGACTCCTTTTGGATGTTGTAGTCAG 9509 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | | |||| || || || | || || || |||||||| | ||| || ||||| || | Sbjct 9510 ACAAAGTTCTGCCATCCTCCAACTGCTTACCGGCAAAGATCAATCTCTGCTGATCAGGTG 9569 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | ||||| |||||||| || |||||| || ||||| ||||| || || || || | Sbjct 9570 GGATTCCCTCCTTATCCTGGATCTTTTGCTTGACATTGTCAATGGTGTCTGAAGACTCCA 9629 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATT 82814 | ||||| || || ||||| || ||||| ||||| || || || |||||| || Sbjct 9630 CCTCCAAGGTGATAGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCATTTTT 9682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981814897091542