Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq423 156 8e-33
seq208 145 1e-29
>seq423
Length=50725
Score = 156 bits (172), Expect = 8e-33
Identities = 176/236 (75%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||||||| | || ||| ||||| ||||| || || ||||| || || || ||||
Sbjct 3595 TACCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAG 3654
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | | |||| ||||| || | || || ||||||||||| | ||| || ||||| || |
Sbjct 3655 ACAAAGTTCTGCCGTCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTG 3714
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| ||||| ||||| ||||| |||||| ||| ||||| ||||| || || || || |
Sbjct 3715 GAATTCCCTCCTTGTCTTGGATCTTTTGTTTGACATTGTCAATAGTGTCGGAAGACTCAA 3774
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATTATA 82817
| || | || || ||||| || ||||| ||||| || || || |||||| | |||
Sbjct 3775 CCTCAAGGGTGATGGTCTTACCGGTCAAAGTCTTAACGAAAATTTGCATTTTGATA 3830
>seq208
Length=10633
Score = 145 bits (160), Expect = 1e-29
Identities = 172/233 (74%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
||||||||||||| | || || ||||| ||||| || || || || || || || ||||
Sbjct 9450 TACCTCCTCTCAATCTCAAGACCAAGTGAAGAGTTGACTCCTTTTGGATGTTGTAGTCAG 9509
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | | |||| || || || | || || || |||||||| | ||| || ||||| || |
Sbjct 9510 ACAAAGTTCTGCCATCCTCCAACTGCTTACCGGCAAAGATCAATCTCTGCTGATCAGGTG 9569
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| ||||| |||||||| || |||||| || ||||| ||||| || || || || |
Sbjct 9570 GGATTCCCTCCTTATCCTGGATCTTTTGCTTGACATTGTCAATGGTGTCTGAAGACTCCA 9629
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATT 82814
| ||||| || || ||||| || ||||| ||||| || || || |||||| ||
Sbjct 9630 CCTCCAAGGTGATAGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCATTTTT 9682
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981814897091542
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |