Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq14 158 3e-33 >seq14 Length=27313 Score = 158 bits (174), Expect = 3e-33 Identities = 309/456 (68%), Gaps = 3/456 (1%) Strand=Plus/Minus Query 110520 TCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAA 110579 |||||||| | | | ||| || ||||| |||||||||||||| || || || | ||| Sbjct 17977 TCTTGCTTCTTAGTTGCAATGAAGGATGACTCTATTGAAGGTATCTACGACACTTTGAAA 17918 Query 110580 GAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGC 110639 | ||| | ||||| || | |||| || |||||| | || ||||| | ||||| Sbjct 17917 CAGTGTGCCTTGATTTCCAAGACGGCTGGTGGTATTGGTCTACATATTCATAACATTCGT 17858 Query 110640 TCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTA 110699 || | ||| || | || || | || ||| | || | ||| || |||| ||| | Sbjct 17857 TCTACAGGTTCATACATTGCTGGTACCAACGGTACATCCAATGGTATTATTCCTATGGTT 17798 Query 110700 AGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCA 110756 | || |||||| ||||| | ||||| | ||||||||| |||||| || | Sbjct 17797 CGTGTGTTCAACAGTACTGCTAGGTATGTTGACCAAGGTGGTAACAAGAGACCAGGTGCC 17738 Query 110757 TTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAA 110816 |||||||||| | |||||||||||| ||||||| ||||| ||| | || | | || Sbjct 17737 ATTGCTATCTACTTAGAACCTTGGCATGCAGATATCTTTGACTTCATCGATATCAGGAAG 17678 Query 110817 AATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGAT 110876 ||||| || || || | ||||||||||| || || | ||||| | ||| Sbjct 17677 AATCACGGTAAGGAGGAGATCCGTGCACGTGATTTGTTCCCAGCTCTTTGGATCCCTGAT 17618 Query 110877 TTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCT 110936 |||||||||| |||||| || |||||| | ||| || | | | |||| | | Sbjct 17617 CTATTCATGAAGCGTGTTGAACAAAATGATACATGGACTTTGTTTTCTCCTTCTGAGGCC 17558 Query 110937 CCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAA 110972 || ||||| || ||||| ||||| | ||||||||| Sbjct 17557 CCAGGTCTTTCAGATGTTTATGGTGACGAGTTTGAA 17522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186797928493858