Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq208 122 2e-22
seq423 107 5e-18
>seq208
Length=10633
Score = 122 bits (134), Expect = 2e-22
Identities = 142/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || || || ||||| ||||| ||||| ||| ||||| | || || ||||||
Sbjct 9654 ACGGGTAAGACTATCACCTTGGAGGTGGAGTCTTCAGACACCATTGACAATGTCAAGCAA 9595
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| || || || || ||||| || || || ||| | ||||| ||||| |||
Sbjct 9594 AAGATCCAGGATAAGGAGGGAATCCCACCTGATCAGCAGAGATTGATCTTTGCCGGTAAG 9535
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|||||||| ||||| || |||||| | || |||||| |||| || ||||| |||||||||
Sbjct 9534 CAGTTGGAGGATGGCAGAACTTTGTCTGACTACAACATCCAAAAGGAGTCAACTCTTCAC 9475
Query 206374 CTTGTTTTGAGA 206385
| || ||||||
Sbjct 9474 TTGGTCTTGAGA 9463
>seq423
Length=50725
Score = 107 bits (118), Expect = 5e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || || || ||||| | || || || ||| ||||| | || || || |||
Sbjct 3799 ACCGGTAAGACCATCACCCTTGAGGTTGAGTCTTCCGACACTATTGACAATGTCAAACAA 3740
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| ||||| || || |||||| || || || ||| | ||||| || || |||
Sbjct 3739 AAGATCCAAGACAAGGAGGGAATTCCACCTGATCAGCAGAGATTGATCTTTGCTGGTAAG 3680
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|||||||| || || || |||||| | || |||||| | ||||| ||||| |||||||||
Sbjct 3679 CAGTTGGAGGACGGCAGAACTTTGTCTGACTACAACATTCAGAAGGAGTCCACTCTTCAC 3620
Query 206374 CTTGTTTTGAGA 206385
| |||||||||
Sbjct 3619 TTGGTTTTGAGA 3608
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181805991046738
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |