Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq423 84.2 2e-11 >seq423 Length=50725 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/234 (68%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 ||| |||||| | || || || || || ||||| || | ||||| | || || || | Sbjct 3827 CAAAATGCAAATTTTCGTTAAGACTTTGACCGGTAAGACCATCACCCTTGAGGTTGAGTC 3768 Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 ||| ||||| || | || |||||||| || || || ||||| || || || || Sbjct 3767 TTCCGACACTATTGACAATGTCAAACAAAAGATCCAAGACAAGGAGGGAATTCCACCTGA 3708 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350 |||||| ||| | || | | || || || | || || | |||| | | || || Sbjct 3707 TCAGCAGAGATTGATCTTTGCTGGTAAGCAGTTGGAGGACGGCAGAACTTTGTCTGACTA 3648 Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAA 25404 ||| ||||| || || ||||| |||| || || || ||||||||||| || || Sbjct 3647 CAACATTCAGAAGGAGTCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGGTAA 3594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445088958720960