Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq187 125 1e-22
seq290 100 4e-15
>seq187
Length=11729
Score = 125 bits (138), Expect = 1e-22
Identities = 322/489 (66%), Gaps = 10/489 (2%)
Strand=Plus/Plus
Query 262917 TGGCCTGCGCAACTCGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCT 262976
|||||| ||||||||| | | ||||| |||||||||||||| |||| |||||||||||
Sbjct 3140 TGGCCTCCGCAACTCGCTCTTGGTGGCCCTCATGCCCACGGCATCGACCTCGCAGATCCT 3199
Query 262977 GGGCAACACCGAGGCGTTCGAGGTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTC 263036
||| ||| ||| |||||| |||||| ||||||||||||||| | || |||||
Sbjct 3200 GGGGTTCACGGAGTGCTTCGAGCCCATCACTTCCAACATCTACACGCGAAGAGTTCTCTC 3259
Query 263037 GGGCGACTTTACC--GTGGTCAACCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTG 263094
||||| ||| || |||||| | || ||| | | | | ||||||
Sbjct 3260 TGGCGA--GCACCAGGTAGTCAACTCGTATCTCGTCGATGATCTAGACCGTCTGGGCCTG 3317
Query 263095 TGGACGCCCGACTTTCGCGACCGGCTCATTGCGGCACAGGGCTCGGTGCAGGGCTTTGAC 263154
|||| | || | |||| | | || || ||| | ||||| | |||| | | | |
Sbjct 3318 TGGAATGCACACATGAAGGACCAGATTATCGCCGCAAACGGCTCCATCCAGGACATAGCC 3377
Query 263155 GACGAGGAGGTGCCGCCCGATCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAAC 263214
| | | ||| || ||| |||| ||||||||| ||||| || | |
Sbjct 3378 GGC------ATCCCGGAACATACCAAACAACTCTACAAGACCGTCTGGGACATGTCGCAG 3431
Query 263215 CGGGTGACCATTGATATGGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTC 263274
| | | |||||| ||||| |||||||| || ||||| || ||||| ||| |
Sbjct 3432 AAGATCATCATTGACATGGCTGCCGACCGTGCTCCCTACGTTGACCAATCACAGAGCATG 3491
Query 263275 AACCTGTACCTCGCCGACCCGACGGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGG 263334
||||| | |||| ||| ||| || | || || |||||| |||||| |||
Sbjct 3492 AACCTCTTCCTCAAGGACTGCACGCTCGCCAAGATGACCAGCATGCACTTCTATGCCTGG 3551
Query 263335 CGTCGCGGCCTCAAGACTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCATT 263394
| ||| | ||||| ||||||||||| || | |||| | |||| || | |||||
Sbjct 3552 CACAAGGGCTTGAAGACCGGCATGTACTACTTGAGGACCCAGGCCGCCTCCCAGGCCATC 3611
Query 263395 CAATTCACC 263403
| ||||||
Sbjct 3612 AAGTTCACC 3620
>seq290
Length=58723
Score = 100 bits (110), Expect = 4e-15
Identities = 348/537 (65%), Gaps = 12/537 (2%)
Strand=Plus/Minus
Query 1455746 TTTGTCCTGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGC 1455805
||||| ||||||| || | ||| | |||||| ||||||| || ||||| |||||
Sbjct 53674 TTTGTGATGTTCCCTATTCAGTACGATGATATATGGCAAATGTAT-AAGAAGGCGGAGGC 53616
Query 1455806 CTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACTGGGTGTC--- 1455862
||| |||||||| || |||||| | || ||| ||| | |||||
Sbjct 53615 CTCTTTTTGGACTGCTGAGGAGATTGATCTCTCTAAGGACTTGACTGACTGGAACAACAA 53556
Query 1455863 GCTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCG 1455922
| ||| | | ||||| | | || || || || | || |||||| ||||| |
Sbjct 53555 GATGAATGCCAACGAGAGATACTTTATATCGCGTGTTTTGGCATTTTTT-GCCGCTTCTG 53497
Query 1455923 ATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGG 1455982
|||| || || | ||||||| |||| || ||||| |||| ||||| ||||| |
Sbjct 53496 ATGGTATTGTTGACGAGAACTTGGCACAAAATTTCATGAAGCAGGTTCAATTACCAGAAG 53437
Query 1455983 CACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGC 1456042
|| | |||||||| |||||||| | || |||||||||||||| |||||||| |
Sbjct 53436 CAAGAGCCTTTTACGGTTTCCAGATTATGGTTGAGAACATCCACTCTGAGACCTACTCCC 53377
Query 1456043 TCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCG 1456102
| | | || || ||| ||| ||| | ||| ||| || | || || |||
Sbjct 53376 TTTTACTTGAAACGTACATCACCGACAAGAAGGAGTCCGACTACTTGTTCAATGCTATCC 53317
Query 1456103 ACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGG 1456162
| || | || | | | | ||||||| ||||| ||| ||||| ||||| || |
Sbjct 53316 ATACCATTCCACCTATTAAGGAAAAGGCTCTATGGGCTTTGAGATGGATAAACAATGATG 53257
Query 1456163 --GCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTC 1456219
|| | | | ||| ||| | | |||| |||||| | | ||||||| | || |||
Sbjct 53256 ATGCTTTG----TATGCTGAGAGATTGGTCGCCTTTGCTGCCATCGAGGGTGTTTTCTTC 53201
Query 1456220 TCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTT 1456276
|| ||| || | | ||||| ||| | |||||| | || | ||||| || |||
Sbjct 53200 TCTGGCTCGTTTGCCTCTATCTTCTGGTTGAAGAAGAGAGGTTTGATGCCTGGACTT 53144
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177716870102436
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |