Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq423 140 3e-28 seq208 134 1e-26 >seq423 Length=50725 Score = 140 bits (154), Expect = 3e-28 Identities = 178/245 (73%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 35496 TCATCTCTTTATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAA 35555 || ||| || || ||||| | || ||||| ||||| || | || |||||| |||| Sbjct 3583 TCTTCTTCTTCTTACCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGAA 3642 Query 35556 TGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCT 35615 ||||||| || | ||| |||| |||| |||| ||||||||| ||||| ||||| | || Sbjct 3643 TGTTGTAGTCAGACAAAGTTCTGCCGTCCTCCAACTGCTTACCAGCAAAGATCAATCTCT 3702 Query 35616 GCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGT 35675 |||| || | |||| | ||||||||| ||||||||| || | | | | | |||| Sbjct 3703 GCTGATCAGGTGGAATTCCCTCCTTGTCTTGGATCTTTTGTTTGACATTGTCAATAGTGT 3762 Query 35676 CGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA 35735 || || || ||||| | ||||| || ||||| |||||||| || || || || |||| Sbjct 3763 CGGAAGACTCAACCTCAAGGGTGATGGTCTTACCGGTCAAAGTCTTAACGAAAATTTGCA 3822 Query 35736 TTCTG 35740 || || Sbjct 3823 TTTTG 3827 >seq208 Length=10633 Score = 134 bits (148), Expect = 1e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 35519 AACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGC 35578 || ||||| ||||| || | || ||||||||| |||||||| || | ||| |||| Sbjct 9461 AATCTCAAGACCAAGTGAAGAGTTGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTG 9520 Query 35579 TCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCC 35638 | || |||| ||||||||| ||||| ||||| | |||||| || | || | | |||| Sbjct 9521 CCATCCTCCAACTGCTTACCGGCAAAGATCAATCTCTGCTGATCAGGTGGGATTCCCTCC 9580 Query 35639 TTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTG 35698 || ||| |||||||||||| | | | | | ||||| || |||||||||| ||| Sbjct 9581 TTATCCTGGATCTTTTGCTTGACATTGTCAATGGTGTCTGAAGACTCCACCTCCAAGGTG 9640 Query 35699 ATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737 || || ||||||||||| || || || || || |||||| Sbjct 9641 ATAGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCATT 9679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450788089048240