Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq423 140 3e-28
seq208 134 1e-26
>seq423
Length=50725
Score = 140 bits (154), Expect = 3e-28
Identities = 178/245 (73%), Gaps = 0/245 (0%)
Strand=Plus/Plus
Query 35496 TCATCTCTTTATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAA 35555
|| ||| || || ||||| | || ||||| ||||| || | || |||||| ||||
Sbjct 3583 TCTTCTTCTTCTTACCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGAA 3642
Query 35556 TGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCT 35615
||||||| || | ||| |||| |||| |||| ||||||||| ||||| ||||| | ||
Sbjct 3643 TGTTGTAGTCAGACAAAGTTCTGCCGTCCTCCAACTGCTTACCAGCAAAGATCAATCTCT 3702
Query 35616 GCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGT 35675
|||| || | |||| | ||||||||| ||||||||| || | | | | | ||||
Sbjct 3703 GCTGATCAGGTGGAATTCCCTCCTTGTCTTGGATCTTTTGTTTGACATTGTCAATAGTGT 3762
Query 35676 CGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA 35735
|| || || ||||| | ||||| || ||||| |||||||| || || || || ||||
Sbjct 3763 CGGAAGACTCAACCTCAAGGGTGATGGTCTTACCGGTCAAAGTCTTAACGAAAATTTGCA 3822
Query 35736 TTCTG 35740
|| ||
Sbjct 3823 TTTTG 3827
>seq208
Length=10633
Score = 134 bits (148), Expect = 1e-26
Identities = 161/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 35519 AACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGC 35578
|| ||||| ||||| || | || ||||||||| |||||||| || | ||| ||||
Sbjct 9461 AATCTCAAGACCAAGTGAAGAGTTGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTG 9520
Query 35579 TCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCC 35638
| || |||| ||||||||| ||||| ||||| | |||||| || | || | | ||||
Sbjct 9521 CCATCCTCCAACTGCTTACCGGCAAAGATCAATCTCTGCTGATCAGGTGGGATTCCCTCC 9580
Query 35639 TTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTG 35698
|| ||| |||||||||||| | | | | | ||||| || |||||||||| |||
Sbjct 9581 TTATCCTGGATCTTTTGCTTGACATTGTCAATGGTGTCTGAAGACTCCACCTCCAAGGTG 9640
Query 35699 ATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737
|| || ||||||||||| || || || || || ||||||
Sbjct 9641 ATAGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCATT 9679
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450788089048240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |