Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq14 262 5e-65
seq290 246 4e-60
>seq14
Length=27313
Score = 262 bits (290), Expect = 5e-65
Identities = 743/1131 (66%), Gaps = 14/1131 (1%)
Strand=Plus/Plus
Query 69349 TTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATA 69408
||||| || |||| || | |||||||||||| |||| ||||| |||||||||| ||
Sbjct 17355 TTGATGGTTCCCAAGTTCTTTTGATTACTCTTTCTGTTGCAGGCATCCTTGTAAATCATG 17414
Query 69409 AACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTT 69468
|| || ||||| ||||| |||||| || | ||| | ||| | | ||| ||
Sbjct 17415 AAAGGCGTACCGGTTTCTGTCTGAGCCTCCAAAATCTGATACCACAACTTCTGAGCCTTA 17474
Query 69469 ATTACGGT-CTTGTAACGCTTCTCT--TTTTCATATTGTGTATATAGCCGTTCGAATTCA 69525
| |||| ||| | | | || || || || || | || || | | ||| || ||
Sbjct 17475 A---CGGTTCTTCTTCCACGTCCCTCCTTCTCGTAACGAGTGTACAACTTTTCAAACTCG 17531
Query 69526 TCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCA 69585
|| || ||||||| | || || ||| ||| | | ||| | ||| ||||
Sbjct 17532 TCACCATAAACATCTGAAAGACCTGGGGCCTCAGAAGGAGAAAACAAAGTCCATGTATCA 17591
Query 69586 TCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTG 69645
| | | ||| || ||||| |||||||| || |||||||||||| || | ||| |
Sbjct 17592 TTTTGTTCAACACGCTTCATGAATAGATCAGGGATCCAAAGAGCTGGGAACAAATCACGT 17651
Query 69646 GTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAA 69705
| | | || || || || ||| || | | ||||| || || | ||||| | |
Sbjct 17652 GCACGGATCTCCTCCTTACCGTGATTCTTCCTGATATCGATGAAGTCAAAGATATCTGCA 17711
Query 69706 TGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATG 69765
||||| ||||||| || || || ||| | || |||| || || || || || || |
Sbjct 17712 TGCCAAGGTTCTAAGTAGATAGCAATGGCACCTGGTCTCTTGTTACCACCTTGGTCAACA 17771
Query 69766 TATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTT 69825
|| || ||||| | || | || | | ||| |||||||||||||| ||| |||| ||
Sbjct 17772 TACCTAGCAGTACTGTTGAACACACGAACCATAGGAATAATACCATTGGATGTACCGTTG 17831
Query 69826 GTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCT 69885
|| |||| ||| || ||| | | ||||| ||| |||| |||||| || || ||
Sbjct 17832 GTACCAGCAATGTATGAACCTGTAGAACGAATGTTATGAATATGTAGACCAATACCACCA 17891
Query 69886 GCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCA 69945
||| | || || || | ||||| ||||||| ||||| || ||||| || || |||
Sbjct 17892 GCCGTCTTGGAAATCAAGGCACACTGTTTCAAAGTGTCGTAGATACCTTCAATAGAGTCA 17951
Query 69946 TCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAAT 70005
|| |||| || | || || ||||| || | || ||| || ||||||||
Sbjct 17952 TCCTTCATTGCAACTAAGAAGCAAGACGACATCTGTGGGCGTGGAGTACCGGCATTAAAC 18011
Query 70006 AATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCT 70065
||||| ||||| ||||| ||||| || | | || | || || || | || | | ||
Sbjct 18012 AATGTTGGAGAGGCGTGTGTGAAGTATCTCTTCGACATCAAATCATACGACTCCAAAACT 18071
Query 70066 GATTCTATATC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCG 70124
||||| ||| | |||||||| | || || | ||| | | ||||||||| |
Sbjct 18072 TTAGGAATATCATCACCG-TGAATTCCAACGGCAACTCTCATAAGAAGATGCTGAGGCCT 18130
Query 70125 TTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAA 70184
||| | ||| |||||| ||||||| ||||| || || || ||||| |||||
Sbjct 18131 CTCTGCAACCTTACCATTTATCCTCAACAGATATGAACGCTCTAGGGTCTTAAAGCCAAA 18190
Query 70185 ATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATAT 70242
||||| || ||||| || | || || |||| | || || | | |||||| |
Sbjct 18191 GTAGTTATAGCTGAAA--TCACGGTCATAGTTAATGGCCGAGTTCAACTCATCCTTGTGC 18248
Query 70243 TTGGTAACTATATCCATAACAGTAGGTGAGATAATCGGAGATCGTTTACCATTTTTAGGA 70302
|| | || || | ||| ||||| || || ||| || |||| ||
Sbjct 18249 TTCATGACAATCTTGTAAACTTCTTCAGAGATCATAGGGGATTTCTTCTGGGTTTTTGGG 18308
Query 70303 TTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGT 70362
||| ||||||| | | |||||| || |||||| ||| | || || || | ||||||
Sbjct 18309 TTATAATAGTTGTAAAGATCTTCAATAACATCAGAGAATGGCTTCTTAGTCTGCTTGTGC 18368
Query 70363 AAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAA 70422
||||| || ||||| | |||||| || | | ||||||| || ||||| ||||| ||
Sbjct 18369 AAATTAGAAATGGCAAGTCTGGCGGCCAAAGTAGCATAATCTGGATGAATGGTAGT-CAT 18427
Query 70423 GTA-GCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCC 70472
|| || || |||| |||| ||| | || || || ||||| ||||| ||
Sbjct 18428 ATATGCCGCAGTTTCAGCAGTTAAGTTGTCCAACTCAATAGTGGTAACACC 18478
Score = 93.3 bits (102), Expect = 6e-14
Identities = 497/786 (63%), Gaps = 11/786 (1%)
Strand=Plus/Plus
Query 68395 GCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAA 68454
|||| | |||||| | ||||||||||| || |||| ||| |||| ||||| ||
Sbjct 16386 GCGGCCTGTGTACGCAAGTAGTACATACCTGTCTTCAAACCCTTCTTCCAGCCGTAAAAG 16445
Query 68455 TGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATA--TGAATATTCATCGATTGAC 68512
||||| || | || | |||| || | | || || ||||| ||||||
Sbjct 16446 TGCATGGACGTCAACTTACCCATAGTTGG--CGATTGCAAGTGGATGTTCATGGATTGAG 16503
Query 68513 TTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTT 68572
|| ||| | || ||||| || || ||||| | || | | || |||| || ||
Sbjct 16504 ACTGGCAAATGTAGGCACCTCTGTCGGCAGCCATGTCGATGACAGATTTCTGAGAAAGTT 16563
Query 68573 CCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGGCTCG-TA--TTTTGAATGG 68629
|||||| |||| | | | | || || | ||||||| | | || || |||||||
Sbjct 16564 CCCAAACAGTCCTGTACAATTTCTTAATGTTGTCTGGAATATTAGGTAAGTTCTGAATGG 16623
Query 68630 ATCCACCATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTA 68689
||||| || || || | |||||| || |||| ||||| | | | || | |
Sbjct 16624 ATCCATTGTCATGAATGATGAAATTCTTCATTGCATCGTTCCATATTCCCATATCAATAA 16683
Query 68690 AAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGT 68749
| || || | | ||||| || || || || || |||| | ||||| | |
Sbjct 16684 GGTCCCTTAGCATGTAAGGATTGACAATCTGGAACTCACCAGCAAGAACTCTTCTCTGAT 16743
Query 68750 AAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATG 68809
| || ||| ||| |||| || | | || || | |||| ||| |||| || || |
Sbjct 16744 AGATGTTAGAGGTGAATGGCTCAAAGCACTCGTTGTAACCCATAATCTGAGAGGTAGAGG 16803
Query 68810 CAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTT 68869
||||||||||||| || ||||| | |||||||||||||| | ||| || | |
Sbjct 16804 CAGTTGGCATAGGAGCGACCAAAAGCGAATTTCTAAGACCATCCTTAGCGATCTTGGCCT 16863
Query 68870 TTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAA 68929
| | | | ||||||||| ||||||| ||| |||||| | |||||| || ||||
Sbjct 16864 TCAAAGTCTCCCAATCCCACAGATCAGTTGGCTTCTTATTCCACATATCGTACTGGAGAA 16923
Query 68930 TTCCGTTACTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTT 68989
| || || || || || | || || || || | || || | ||| || |
Sbjct 16924 TACCCTTGGAAGCTGGAGAGCCTTCGTAGGTCTCGTACGTACCCTCTTCCACAGAAAGCT 16983
Query 68990 CACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTT 69049
| | |||| | ||||| | || | || ||||| |||| | || || ||
Sbjct 16984 GATTTGATTCCTCCAGAGCACCATGGTACAAGGTCTCGAATATCTGTATGTTAAGCTCAC 17043
Query 69050 GTGCTTCTAGACTATCGAATGGATAATGTAA--AAGAATAAATGCATCTGCCAATCCCTG 69107
| |||||| | | || ||||| ||| | | | ||| || | ||| || | || ||
Sbjct 17044 GAGCTTCTGGGCAGTCAAATGG-CAATCTGAGCATGAA-GAACGTATCCGCAAGACCTTG 17101
Query 69108 AACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATA 69167
||| |||| | |||||||||| | |||| | || || | || ||||||| || ||
Sbjct 17102 AACACCAAGAGCGATAGGTCTGTTTCTCATGTTGGAGTTGCGGGCCTCTGGAACTGGGTA 17161
Query 69168 ATAATT 69173
|||||
Sbjct 17162 GTAATT 17167
>seq290
Length=58723
Score = 246 bits (272), Expect = 4e-60
Identities = 603/905 (67%), Gaps = 12/905 (1%)
Strand=Plus/Plus
Query 39305 TCTTGTGACATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTT 39364
|||| || |||||| || || ||||| ||| ||| | ||||| || || |||||
Sbjct 52776 TCTTTTGCCATAACACCAGCCTTCTGGTAGTCAGAAACTCTCTTCTCAAAGAAGTTAGTC 52835
Query 39365 TTGCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAttttttt 39424
|| || |||| || || || ||||| || || || ||||| || ||||| || |||
Sbjct 52836 TTACCAGCCAAGGAAATGTTCTCCATAAAGTCGAATGGATTGGTAGCATTGTAAACTTTC 52895
Query 39425 ttAAATCCTAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATT 39484
| | |||| || | || |||||| || ||| ||||| | || ||||||
Sbjct 52896 TCACATCCCAAAGCAATAAGCAATCTGTCGGCACAGAATTCAACATAATGGGCCATCATA 52955
Query 39485 TCACAATTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTT-AGAAACTCTTTTTCGAT 39543
|| | ||||| || | | |||||| ||||| || | ||||| |||| | | ||
Sbjct 52956 TCGAAGTTCATACCAAGCAAAGAAACTGGGAGAGCATCACTCCAGAAAGTCTTCT-CAAT 53014
Query 39544 GTCTACGGCCTCTGTTATTATCGATGTTACTACCT-CATCACTCGGTGGATGCAATAAAT 39602
| || ||||| || || || | ||| || | | ||| ||||||||| ||||
Sbjct 53015 ATTGACAGCCTCGGTCATAATTT-TCTTAATAATAACCTTACTAGGTGGATGCTTCAAAT 53073
Query 39603 GTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGT 39662
| |||| | ||| ||||| ||| |||||| |||||||| || | ||| | || |
Sbjct 53074 GAGAGAACAAGAGGCATGCGAAATCAGTATGTAGACCCTCATCCCTGCAAATAAGCTCAT 53133
Query 39663 TAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAG 39722
| || || || ||||||||||| | ||| | ||| || | ||| || || | ||||| |
Sbjct 53134 TGGAGAAGGTAAGTCCAGGCATCAAACCTCTCTTCTTCAACCAGAAGATAGAGGCAAACG 53193
Query 39723 ATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGT---AAC 39779
| ||||| ||||| | || || | || ||||| || || | |||||| | | ||
Sbjct 53194 AGCCAGAGAAGAAAACACCCTCGATGGCAGCAAAGGCGACCAATCTCTCAGCATACAAAG 53253
Query 39780 TTGTATCATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTG 39839
|||||| | |||||| || ||||| ||| || | ||| | | || || |
Sbjct 53254 CATCATCATTGTTTATCCATCTCAAAGCCCATAGAGCCTTTTCCTTAATAGGTGGAATGG 53313
Query 39840 TTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTA 39899
| | |||||||| || | || | || | | || | | || || || | ||
Sbjct 53314 TATGGATAGCATTGAACAAGTAGTCGGACTCCTTCTTGTCGGTGATGTACGTTTCAAGTA 53373
Query 39900 ACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATC 39959
| || || | || || |||||||| |||| | ||||| || |||||||| ||
Sbjct 53374 AAAGGGAGTAGGTCTCAGAGTGGATGTTCTCAACCATAATCTGGAAACCGTAAAAGGCTC 53433
Query 39960 TTGCTTCAGTAATTTGTACCT-CTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATT 40018
||||||| | | ||| |||| || | |||| ||| ||||| || || | || ||
Sbjct 53434 TTGCTTCTGGTAATTGAACCTGCTTCATGAAAT-TTTGTGCCAAGTTCTCGTCAACAATA 53492
Query 40019 CCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTC 40078
|||||| |||||||||||||||||| ||| | ||||| ||| | || | || ||
Sbjct 53493 CCATCAGAAGCGGCAAAAAATGCCAAAACACGCGATATAAAGTATCTCTCGTTGGCATTC 53552
Query 40079 A---ATTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAAC 40135
| || ||||||||| | | || || || | ||| | || ||||| ||||||||
Sbjct 53553 ATCTTGTTGTTCCAGTCAGTCAAGTCCTTAGAGAGATCAATCTCCTCAGCAGTCCAAAAA 53612
Query 40136 GACGCCTCTGCCTTTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACA 40195
|| ||||| ||||| || ||||| | |||||||||| || || || || || || |||
Sbjct 53613 GAGGCCTCCGCCTTCTTATACATTTGCCATATATCATCGTACTGAATAGGGAACATCACA 53672
Query 40196 AATCT 40200
|||||
Sbjct 53673 AATCT 53677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686900402539920
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