Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq290 152 4e-32
seq15 114 1e-20
>seq290
Length=58723
Score = 152 bits (168), Expect = 4e-32
Identities = 395/595 (66%), Gaps = 14/595 (2%)
Strand=Plus/Minus
Query 43697 AGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAG 43756
|| ||||| |||| || ||||| || |||| |||||||||||||| || || || ||
Sbjct 53677 AGATTTGTGATGTTCCCTATTCAGTACGATGATATATGGCAAATGTATAAGAAGGCGGAG 53618
Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGC- 43815
|| || |||||||| || || || ||||| | |||| ||||| | | ||||
Sbjct 53617 GCCTCTTTTTGGACTGCTGAGGAGATTGATCTCTCTAAGGACTTGACTGACTGGAACAAC 53558
Query 43816 ---ATTAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAG 43872
|| || ||| | || | | | |||||||| |||||||| |||||||| ||
Sbjct 53557 AAGATGAATGCCA-ACGAGAGATACTTTATATCGCGTGTTTTGGCATTTTTTGCCGCTTC 53499
Query 43873 CGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAG-TTCAATTACCAG 43931
|| || || || | || || |||| | ||| ||| || ||||||||||||
Sbjct 53498 TGATGGTATTGTTGACGAGAACTTGGC-ACAAAATTTCATGAAGCAGGTTCAATTACCAG 53440
Query 43932 AAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACA 43991
||||| || ||||| || || || ||| | || || || || || || | |||
Sbjct 53439 AAGCAAGAGCCTTTTACGGTTTCCAGATTATGGTTGAGAACATCCACTCTGAGACCTACT 53380
Query 43992 GTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGA 44051
||| | | || |||||||||| || | | ||| | ||||| ||||| |
Sbjct 53379 CCCTTTTACTTGAAACGTACATCACCGACAAGAAGGAGTCCGACTACTTGTTCAATGCTA 53320
Query 44052 TAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAA 44111
| | || | || | ||||| | || || ||||| | | ||||||||| |||
Sbjct 53319 TCCATACCATTCCACCTATTAAGGAAAAGGCTCTATGGGCTTTGAGATGGATAAA--CAA 53262
Query 44112 --ATGATTCTTT---TGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTT 44166
||||| |||| || || || | ||||| ||||| | | || || |||||||
Sbjct 53261 TGATGATGCTTTGTATGCTGAGAGATTGGTCGCCTTTGCTGCCATCGAGGGTGTTTTCTT 53202
Query 44167 TTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGAC 44226
|| || |||||||| | || || ||||| ||||| |||||||||||||||| | ||
Sbjct 53201 CTCTGGCTCGTTTGCCTCTATCTTCTGGTTGAAGAAGAGAGGTTTGATGCCTGGACTTAC 53142
Query 44227 GTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGC 44281
|| || |||||| | || | | ||||| || ||||| ||||| || |||
Sbjct 53141 CTTCTCCAATGAGCTTATTTGCAGGGATGAGGGTCTACATACTGATTTCGCATGC 53087
>seq15
Length=27206
Score = 114 bits (126), Expect = 1e-20
Identities = 311/468 (66%), Gaps = 20/468 (4%)
Strand=Plus/Minus
Query 40862 TGAAGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATATGA 40921
||||| |||||| || || | ||||||||||| | | | |||||||| ||| |||| |
Sbjct 9651 TGAAGATGATCTAGGACCAATATATGGATTTCAATGGAGGCATTTTGGGGCAGAATACAA 9592
Query 40922 C-ACTATGTACTCTGATTATACCAATAAAGGAATGGATCA-ATTACAGTGCGTTATAGAT 40979
||| || || | |||||||| |||||| || || ||| | | | |||| |
Sbjct 9591 GGACTGTG-ACACGGATTATACTGGTAAAGGCTATGACCAGATTGC-GCACATTATCCAC 9534
Query 40980 ACGATTAAATCCGATCCCGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGGAC 41039
|| | ||| | |||| || ||| | ||||| | | || ||||| || ||| |
Sbjct 9533 ACATTAAAAACAAATCCTTATGATCGAAGAATAATTCTTTCAGCATGGAATCCTCCGGCC 9474
Query 41040 GTACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGT----TT--GC 41093
| | ||||||||| |||||||| ||| | | || ||||| ||||| || |
Sbjct 9473 TTCAAAAAGATGGCATTACCACCTTGCCATGTCATGTGCCAGTTCTACGTGAGTTTCAGA 9414
Query 41094 AATGGTGAAC------TGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGG 41147
| ||| | | || ||||| ||||||| ||||| | || | || || ||
Sbjct 9413 ACTGGAAAGCCAAGGTTGAGTTGTCAGATGTATCAGAGATCGTGCGATGTTGGTCTTGGT 9354
Query 41148 GTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACCAAT 41207
|| || ||||| ||||| |||||| | ||||| |||||||||||| ||| ||
Sbjct 9353 GTTCCATTTAATATAGCTTCGTATGCTTTACTCACATATATGATTGCAATGGTTTGTGAT 9294
Query 41208 TTAAAACCTGGTGAATTTGTTCACACGTTA--GGAGATGGACATATTTACATTAATCACA 41265
| |||| || ||||||||| || |||| |||||| || ||||| |||||||
Sbjct 9293 ATGGAACCGGGCGAATTTGTT--CATGTTATGGGAGATTCGCACATTTATTGTAATCACG 9236
Query 41266 TAGAGCCGTTAACAGAACAACTGACACGAAAACCTAGACCATTTCCAA 41313
| || | | | ||||| || |||| || |||||||||||||
Sbjct 9235 TCGAAGCAATCAAGTCGCAACTTGCAAGAAAGCCAAGACCATTTCCAA 9188
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397451262572890
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |