Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq14 233 2e-56
seq290 82.4 1e-10
>seq14
Length=27313
Score = 233 bits (258), Expect = 2e-56
Identities = 1089/1707 (64%), Gaps = 35/1707 (2%)
Strand=Plus/Plus
Query 110369 TAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTG 110428
|||||||| || ||||| | || | ||||| |||| | ||||| || | | |||
Sbjct 16404 TAGTACATACCTGTCTTCAAACCCTTCTTCCAGCCGTAAAAGTGCATGGACGTCAACTTA 16463
Query 110429 GACATCGTTGGACTTTCCATGAAGAGGTTCATACTTTGACTTTGGTCAATGAAG-CGCCC 110487
||| ||||| || || | || |||||| |||| ||| |||| || | ||
Sbjct 16464 CCCATAGTTGGCGATTGCAAGTGGATGTTCATGGATTGAGACTGGCAAATGTAGGCACCT 16523
Query 110488 CCGTTGTGCCGCCATATCAATGACATCCTTCATCTTAATTTCCCAAACTGTGCGATAGAG 110547
| || | || ||||| || |||||| ||| || ||||||||| || | || |
Sbjct 16524 CTGTCG-GCAGCCATGTCGATGACAGATTTCTGAGAAAGTTCCCAAACAGTCCTGTACAA 16582
Query 110548 ATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACCAT 110607
||||| || | ||||| |||| | | ||||| ||||| || | | | ||
Sbjct 16583 TTTCTTAATGTTGTCTGGAATATTAGGTAAGTTCTGAATGGATCCATTGTCATGAATGAT 16642
Query 110608 GAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTT 110667
|| || |||||| | | | ||| | || || | | ||||| | | | ||
Sbjct 16643 GAAATTCTTCATTGCATCGTTCCATATTCCCATATCAATAAGGTCCCTTAGCATGTAAGG 16702
Query 110668 GTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGG 110727
|||||||| |||||||| || || ||||||| | |||||||| | ||| ||||
Sbjct 16703 ATTGACAATCTGGAACTCACCAGCAAGAACTCTTCTCTGATAGATGTTAGAGGTGAATGG 16762
Query 110728 TTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCAT 110787
|||||||| || || | ||||| || || | ||| ||||| |||||||| || || |
Sbjct 16763 CTCAAAGCACTCGTTGTAACCCATAATCTGAGAGGTAGAGGCAGTTGGCATAGGAGCGAC 16822
Query 110788 CAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTA 110847
|||||| || | |||||| | || ||| |||| | | ||||| || |
Sbjct 16823 CAAAAGCGAATTTCTAAGACCATCCTTAGCGATCTTGGCCTTCAAAGTCTCCCAATCCCA 16882
Query 110848 --GTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGA 110905
| | || |||| ||| |||| |||| || |||| || | || | ||| || |||
Sbjct 16883 CAGATCAG-TTGGCTTCTTATTCC-ACATATCGTACTGGAGAATACCCTTGGAAGCTGGA 16940
Query 110906 GAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGG 110965
|| || || |||| || || | ||| | | ||| | | | |||||||
Sbjct 16941 GAGCCTTCGTAGGTCTCGTACGTACCCTCTTCCACAGAAAGCTGATTTGATTCCTCCAGA 17000
Query 110966 GATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCA 111025
| | || |||| ||| || || || | || | ||| ||||| | |||
Sbjct 17001 GCACCATGGTACAAGGTCTCGAATATCTGTATGTTAAGCTCACGAGCTTCTGGGCAGTCA 17060
Query 111026 AATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGT 111085
|||| | | | || | || |||||| |||||||||||||| | | | ||||||
Sbjct 17061 AATGGCAATCTGAGCATGAAGAACGTATCCGCAAGACCTTGAACACCAAGAGCGATAGGT 17120
Query 111086 CTGTGTCGCATATTAGACTTTCGCGCAGTCTC-AACGGGATAAAAATTTCTGTCAATGAC 111144
|||| || ||| || || || || || ||| ||| || || |||| |||||||||||
Sbjct 17121 CTGTTTCTCATGTTGGAGTTGCGGGCC-TCTGGAACTGGGTAGTAATTCCTGTCAATGAC 17179
Query 111145 TCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAAT-----CA 111199
||||| | || || |||| ||| ||||| | || | || ||| | | ||
Sbjct 17180 ACGGTTCAAGTTACGTGTGACAACCTTGGTGATCTTGTGCAACTTCTCAAAGTTGAACCA 17239
Query 111200 AAAGTGCGAGTCTCTTCA---TTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAA 111256
| |||| | || || | ||| | || | | || |||||| || ||
Sbjct 17240 ACAGTG--ATCCTTGTCGGACTCAACAAATGCAGGCAAGCAAATGTTTGCCAAGTTACAC 17297
Query 111257 ACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTA 111316
||| | |||||| | | |||||| | || || || || || ||| |||
Sbjct 17298 ACACCGACCTCATCTGGAGAAGAGTACTCGACAACCTCACAGCACAAATTCGAAGACTTG 17357
Query 111317 ATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAG 111376
|| || ||||| |||||||| |||||||| ||||||| ||||||||||| | |||| |
Sbjct 17358 ATGGTTCCCAAGTTCTTTTGATTACTCTTTCTGTTGCAGGCATCCTTGTAAATCATGAAA 17417
Query 111377 GGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTAC 111435
||||| || || || ||||| | | | ||| | ||| ||| || | | ||
Sbjct 17418 GGCGTACCGGTTTCTGTCTGAGCCTCCAAAATCTGATACCACAACTTCTGAGCCT----T 17473
Query 111436 AATGG--CGT-TGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTC 111492
|| || | | | | ||||||||| |||||| ||||| | ||||||||| ||
Sbjct 17474 AACGGTTCTTCTTCCACGTCCCTCCTTCTCGTAACGAGTGTACAACTTTTCAAACTCGTC 17533
Query 111493 ACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACC 111552
||| | || || |||||||| |||| ||| | || | || |||| | ||
Sbjct 17534 ACCATAAACATCTGAAAGACCTGGGGCCTCAGAAGGAGAAAACAAAGTCCATGTATCATT 17593
Query 111553 TTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTC-TAC 111611
|| ||||| ||||||||||| || || || ||||| || | || || | ||| | | |
Sbjct 17594 TTGTTCAACACGCTTCATGAATAGATCAGGGATCCAAAGAGCTGGGAACAAATCACGTGC 17653
Query 111612 ACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGT 111671
|| || ||| || | ||| || || | | || | ||| || | |||||| || |
Sbjct 17654 ACGGA-TCTCCTCCTTACCGTGATTCTTCCTGATATCGATGAAGTCAAAGATATCTGCAT 17712
Query 111672 GCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTTACA 111727
|||| || || | |||| || || | || || | | ||| |||| | |||
Sbjct 17713 GCCAAGGTTCTAAGTAGATAGCAATGGCACCTGGTCTCTTG-TTACCACCTTGGTCAACA 17771
Query 111728 TAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTT 111787
|| | || || ||| || || |||| ||| ||||||||||||| ||| ||| ||
Sbjct 17772 TACCTAGCAGTACTGTTGAACACACGAACCATAGGAATAATACCATTGGATGTACCGTTG 17831
Query 111788 GTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCA 111847
|| || ||| || | | | | | ||| || || | |||||||| |||
Sbjct 17832 GTACCAGCAATGTATGAACCTGTAGAACGAATGTTATGAATATGTAGACCAATACCACCA 17891
Query 111848 GCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCC 111907
||| ||| || || ||||||| | | ||| | |||||||| | || |||||
Sbjct 17892 GCCGTCTTGGAAATCAAGGCACACTGTTTCAAAGTGTCGTAGATACCTTCAATAGAGTCA 17951
Query 111908 TCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAG 111967
||||| | || | | ||||||| |||||||| || | ||| ||||| ||||| ||
Sbjct 17952 TCCTTCATTGCAACTAAGAAGCAAGACGACATCTGTGGGCGTGGAGTACCGGCATTAAAC 18011
Query 111968 AGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGAC 112026
| ||||| | ||||| |||| || || | |||||| || || | |||||| ||
Sbjct 18012 AATGTTGGAGAGGCGTGTGTGAA-GTATCTCTTCGACATCAAATCATACGACTCCAAAAC 18070
Query 112027 AGAATCAATGTCTTCCCCGTGGATGCC 112053
| ||| || || ||||| || ||
Sbjct 18071 TTTAGGAATATCATCACCGTGAATTCC 18097
>seq290
Length=58723
Score = 82.4 bits (90), Expect = 1e-10
Identities = 86/113 (76%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 122671 TGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCC 122730
|| ||||||||||| | | ||||||| ||||| |||||| || || ||||| | |||
Sbjct 53103 TGTAGACCCTCATCCCTGCAAATAAGCTCATTGGAGAAGGTAAGTCCAGGCATCAAACCT 53162
Query 122731 CGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTC 122783
| |||||||||||| | |||| | || || || |||||||| | ||||||
Sbjct 53163 CTCTTCTTCAACCAGAAGATAGAGGCAAACGAGCCAGAGAAGAAAACACCCTC 53215
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628024322308800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |