Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq14 239 6e-58
>seq14
Length=27313
Score = 239 bits (264), Expect = 6e-58
Identities = 1121/1757 (64%), Gaps = 45/1757 (3%)
Strand=Plus/Plus
Query 117798 TCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTC 117857
|||| | |||| || |||| | || ||||| || || | ||||||||| || |||
Sbjct 16359 TCAACGGTGAATTGGATGGCACGAGCAGCGGCCTGTGTACGCAAGTAGTACATACCTGTC 16418
Query 117858 TTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTT 117917
|| | |||| ||||||| | || | ||||| || | |||||| | ||||| |
Sbjct 16419 TTCAAACCCTTCTTCCAGCCGTAAAAGTGCATGGACGTCAACTTACCCATAGTTGGCGAT 16478
Query 117918 TCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATA 117977
| || | || |||||| ||| || || ||| || || | || || |||||
Sbjct 16479 TGCAAGTGGATGTTCATGGATTGAGACTGGCAAATGTAGGCACCTCTGTCGGCAGCCATG 16538
Query 117978 TCAATCACATCCTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCT 118037
|| || ||| ||| | |||||| ||||||||||| | |||||||| | |||
Sbjct 16539 TCGATGACAGATTTCTGAGAAAGTTCCCAAACAGTCCTGTACAATTTCTTAATGTTGTCT 16598
Query 118038 GGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCAT---A 118094
|| |||| | || || ||||||||| | | | |||| || |||||| |
Sbjct 16599 GGAATATTAGGTAAGTTCTGAATGGATCCATTGTCATGAATGATGAAATTCTTCATTGCA 16658
Query 118095 TCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACA 118154
|| || ||| | || || | | || ||| | | | ||||||||
Sbjct 16659 TCGTT---CCATATTCCCATATCAATAAGGTCCCTTAGCATGTAAGGATTGACAATCTGG 16715
Query 118155 AACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCA 118214
|||||||| || || | |||| ||||||| || | ||| ||||||||||||||||
Sbjct 16716 AACTCACCAGCAAGAACTCTTCTCTGATAGATGTTAGAGGTGAATGGCTCAAAGCACTCG 16775
Query 118215 TTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTA 118274
|||| ||||| || || | || ||||| || ||||| || || | | ||| ||
Sbjct 16776 TTGTAACCCATAATCTGAGAGGTAGAGGCAGTTGGCATAGGAGCGACCAAAAGCGAATTT 16835
Query 118275 CGGAGACCCTTTTCCCTAATGCGTTC-----CTTGAGAGCGTCCCAGTCGTA--GTTGAG 118327
| ||||| | ||| | ||| || ||| | || ||||| || | | | ||
Sbjct 16836 CTAAGACCAT----CCTTA-GCGATCTTGGCCTTCAAAGTCTCCCAATCCCACAGATCAG 16890
Query 118328 CTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTC 118387
||| || | | ||||||||| ||||||| ||||| | ||| ||||| || || ||
Sbjct 16891 --TTGGCTTCTTATTCCACATATCGTACTGGAGAATACCCTTGGAAGCTGGAGAGCCTTC 16948
Query 118388 AAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCG--CCTCGAGGGCTGCG 118445
| ||||| || | ||||| || | | || | || | |||| || || |
Sbjct 16949 GTAGGTCTCGTACGTACCCTCTTCCACAG--AAAGCTGATTTGATTCCTCCAGAGCACCA 17006
Query 118446 TGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCG 118505
|| |||| || || || || | || | | || || | | ||||| |
Sbjct 17007 TGGTACAAGGTCTCGAATATCTGTATGTTAAGCTCACGAGCTTCTGGGCAGTCAAATGGC 17066
Query 118506 AGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGT 118565
| || | || | || |||||| |||||||| ||||| || | || || | | |
Sbjct 17067 AATCTGAGCATGAAGAACGTATCCGCAAGACCTTGAACACCAAGAGCGATAGGTCTGTTT 17126
Query 118566 CTCATATTAGACTTCCGAGCGGTCTCCA-CGGGATAAAAATTCCTATCGATAACCCTATT 118624
||||| || || || || || ||| | | || || ||||||| || || || | ||
Sbjct 17127 CTCATGTTGGAGTTGCGGGCC-TCTGGAACTGGGTAGTAATTCCTGTCAATGACACGGTT 17185
Query 118625 TAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA---ACTGCG 118681
| || ||||||||||| ||||| | || | ||| || | | || || | |
Sbjct 17186 CAAGTTACGTGTGACAACCTTGGTGATCTTGTGCAACTTCTCAAAGTTGAACCAACAGTG 17245
Query 118682 AGTCTCTTCA---TTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGT 118738
| || || | ||| | ||| | | || |||| ||||||||| |
Sbjct 17246 ATCCTTGTCGGACTCAACAAATGCAGGCAAGCAAATGTTTGCCAAGTTACACACACCGAC 17305
Query 118739 CTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCC 118798
|||||| | || |||||| | || || |||||| || ||| ||| ||||| ||
Sbjct 17306 CTCATCTGGAGAAGAGTACTCGACAACCTCACAGCACAAATTCGAAGACTTGATGGTTCC 17365
Query 118799 CAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCC 118858
||||||||||||||| |||| |||| || ||||||||||||| |||| | ||||| ||
Sbjct 17366 CAAGTTCTTTTGATTACTCTTTCTGTTGCAGGCATCCTTGTAAATCATGAAAGGCGTACC 17425
Query 118859 CGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA-GACATCGGCAGCTGGCACAGTGGCGT 118917
|| || || || | || | ||| | ||| || || | ||| || ||
Sbjct 17426 GGTTTCTGTCTGAGCCTCCAAAATCTGATACCACAACTTCTG-AGCCTTAACGGTTCTTC 17484
Query 118918 TGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCT 118977
| | || ||||| | |||||| ||||| | ||||||||| ||||| | |
Sbjct 17485 TTCCACGTCCCTCCTTCTCGTAACGAGTGTACAACTTTTCAAACTCGTCACCATAAACAT 17544
Query 118978 CTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCC 119037
|||| || ||||| |||| | || | || | || |||| | || | ||||| |
Sbjct 17545 CTGAAAGACCTGGGGCCTCAGAAGGAGAAAACAAAGTCCATGTATCATTTTGTTCAACAC 17604
Query 119038 GCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCG-ACAGCGAGCTTCT 119096
|||||||||| || || |||||||| || || | ||| | ||| || || || | ||
Sbjct 17605 GCTTCATGAATAGATCAGGGATCCAAAGAGCTGGGAACAAATCACGTGCACGGATC-TCC 17663
Query 119097 TCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCC 119156
|| | || ||||| | | || | ||||| | |||||| || ||||| |||||
Sbjct 17664 TCCTTACCGTGATTCTTCCTGATATCGATGAAGTCAAAGATATCTGCATGCCAAGGTTCT 17723
Query 119157 AGGTACACCGCGATTG-ACCCCTTACGACG--ACCAGCCTGGTTTACATACCTCGCAGTG 119213
| ||| | || || | ||| | | |||| | |||| |||||||| |||||
Sbjct 17724 AAGTAGATAGCAATGGCACCTGGTCTCTTGTTACCACCTTGGTCAACATACCTAGCAGTA 17783
Query 119214 GCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAA-- 119271
||| || ||||||| ||| ||||| ||||||| |||| || || || || ||
Sbjct 17784 CTGTTGAACACACGAACCATAGGAATAATACCATTGGATGTACCGTTGGTACCAGCAATG 17843
Query 119272 TACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTG 119331
|| || || | | | | | || || || | ||||||||| || ||| ||| |
Sbjct 17844 TATGAACCT--GTAGAACGAATGTTATGAATATGTAGACCAATACCACCAGCCGTCTTGG 17901
Query 119332 AGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTG 119391
| || || |||| | | | || ||||||| || || || |||||| |||| |||
Sbjct 17902 AAATCAAGGCACACTGTTTCAAAGTGTCGTAGATACCTTCAATAGAGTCATCCTTCATTG 17961
Query 119392 CGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTG 119451
| | | |||||| |||||| || || | || ||||| || || || | ||||| |
Sbjct 17962 CAACTAAGAAGCAAGACGACATCTGTGGGCGTGGAGTACCGGCATTAAACAATGTTGGAG 18021
Query 119452 TCGCGTGGATGAACATACCT-TGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATG 119510
||||| |||| || || | |||||| || || | |||||| || |||||
Sbjct 18022 AGGCGTGTGTGAA-GTATCTCTTCGACATCAAATCATACGACTCCAAAACTTTAGGAATA 18080
Query 119511 TCTTCCCCGTGAATACC 119527
|| || |||||||| ||
Sbjct 18081 TCATCACCGTGAATTCC 18097
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618427639629680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |