Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq14 239 6e-58 >seq14 Length=27313 Score = 239 bits (264), Expect = 6e-58 Identities = 1121/1757 (64%), Gaps = 45/1757 (3%) Strand=Plus/Plus Query 117798 TCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTC 117857 |||| | |||| || |||| | || ||||| || || | ||||||||| || ||| Sbjct 16359 TCAACGGTGAATTGGATGGCACGAGCAGCGGCCTGTGTACGCAAGTAGTACATACCTGTC 16418 Query 117858 TTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTT 117917 || | |||| ||||||| | || | ||||| || | |||||| | ||||| | Sbjct 16419 TTCAAACCCTTCTTCCAGCCGTAAAAGTGCATGGACGTCAACTTACCCATAGTTGGCGAT 16478 Query 117918 TCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATA 117977 | || | || |||||| ||| || || ||| || || | || || ||||| Sbjct 16479 TGCAAGTGGATGTTCATGGATTGAGACTGGCAAATGTAGGCACCTCTGTCGGCAGCCATG 16538 Query 117978 TCAATCACATCCTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCT 118037 || || ||| ||| | |||||| ||||||||||| | |||||||| | ||| Sbjct 16539 TCGATGACAGATTTCTGAGAAAGTTCCCAAACAGTCCTGTACAATTTCTTAATGTTGTCT 16598 Query 118038 GGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCAT---A 118094 || |||| | || || ||||||||| | | | |||| || |||||| | Sbjct 16599 GGAATATTAGGTAAGTTCTGAATGGATCCATTGTCATGAATGATGAAATTCTTCATTGCA 16658 Query 118095 TCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACA 118154 || || ||| | || || | | || ||| | | | |||||||| Sbjct 16659 TCGTT---CCATATTCCCATATCAATAAGGTCCCTTAGCATGTAAGGATTGACAATCTGG 16715 Query 118155 AACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCA 118214 |||||||| || || | |||| ||||||| || | ||| |||||||||||||||| Sbjct 16716 AACTCACCAGCAAGAACTCTTCTCTGATAGATGTTAGAGGTGAATGGCTCAAAGCACTCG 16775 Query 118215 TTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTA 118274 |||| ||||| || || | || ||||| || ||||| || || | | ||| || Sbjct 16776 TTGTAACCCATAATCTGAGAGGTAGAGGCAGTTGGCATAGGAGCGACCAAAAGCGAATTT 16835 Query 118275 CGGAGACCCTTTTCCCTAATGCGTTC-----CTTGAGAGCGTCCCAGTCGTA--GTTGAG 118327 | ||||| | ||| | ||| || ||| | || ||||| || | | | || Sbjct 16836 CTAAGACCAT----CCTTA-GCGATCTTGGCCTTCAAAGTCTCCCAATCCCACAGATCAG 16890 Query 118328 CTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTC 118387 ||| || | | ||||||||| ||||||| ||||| | ||| ||||| || || || Sbjct 16891 --TTGGCTTCTTATTCCACATATCGTACTGGAGAATACCCTTGGAAGCTGGAGAGCCTTC 16948 Query 118388 AAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCG--CCTCGAGGGCTGCG 118445 | ||||| || | ||||| || | | || | || | |||| || || | Sbjct 16949 GTAGGTCTCGTACGTACCCTCTTCCACAG--AAAGCTGATTTGATTCCTCCAGAGCACCA 17006 Query 118446 TGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCG 118505 || |||| || || || || | || | | || || | | ||||| | Sbjct 17007 TGGTACAAGGTCTCGAATATCTGTATGTTAAGCTCACGAGCTTCTGGGCAGTCAAATGGC 17066 Query 118506 AGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGT 118565 | || | || | || |||||| |||||||| ||||| || | || || | | | Sbjct 17067 AATCTGAGCATGAAGAACGTATCCGCAAGACCTTGAACACCAAGAGCGATAGGTCTGTTT 17126 Query 118566 CTCATATTAGACTTCCGAGCGGTCTCCA-CGGGATAAAAATTCCTATCGATAACCCTATT 118624 ||||| || || || || || ||| | | || || ||||||| || || || | || Sbjct 17127 CTCATGTTGGAGTTGCGGGCC-TCTGGAACTGGGTAGTAATTCCTGTCAATGACACGGTT 17185 Query 118625 TAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA---ACTGCG 118681 | || ||||||||||| ||||| | || | ||| || | | || || | | Sbjct 17186 CAAGTTACGTGTGACAACCTTGGTGATCTTGTGCAACTTCTCAAAGTTGAACCAACAGTG 17245 Query 118682 AGTCTCTTCA---TTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGT 118738 | || || | ||| | ||| | | || |||| ||||||||| | Sbjct 17246 ATCCTTGTCGGACTCAACAAATGCAGGCAAGCAAATGTTTGCCAAGTTACACACACCGAC 17305 Query 118739 CTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCC 118798 |||||| | || |||||| | || || |||||| || ||| ||| ||||| || Sbjct 17306 CTCATCTGGAGAAGAGTACTCGACAACCTCACAGCACAAATTCGAAGACTTGATGGTTCC 17365 Query 118799 CAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCC 118858 ||||||||||||||| |||| |||| || ||||||||||||| |||| | ||||| || Sbjct 17366 CAAGTTCTTTTGATTACTCTTTCTGTTGCAGGCATCCTTGTAAATCATGAAAGGCGTACC 17425 Query 118859 CGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA-GACATCGGCAGCTGGCACAGTGGCGT 118917 || || || || | || | ||| | ||| || || | ||| || || Sbjct 17426 GGTTTCTGTCTGAGCCTCCAAAATCTGATACCACAACTTCTG-AGCCTTAACGGTTCTTC 17484 Query 118918 TGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCT 118977 | | || ||||| | |||||| ||||| | ||||||||| ||||| | | Sbjct 17485 TTCCACGTCCCTCCTTCTCGTAACGAGTGTACAACTTTTCAAACTCGTCACCATAAACAT 17544 Query 118978 CTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCC 119037 |||| || ||||| |||| | || | || | || |||| | || | ||||| | Sbjct 17545 CTGAAAGACCTGGGGCCTCAGAAGGAGAAAACAAAGTCCATGTATCATTTTGTTCAACAC 17604 Query 119038 GCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCG-ACAGCGAGCTTCT 119096 |||||||||| || || |||||||| || || | ||| | ||| || || || | || Sbjct 17605 GCTTCATGAATAGATCAGGGATCCAAAGAGCTGGGAACAAATCACGTGCACGGATC-TCC 17663 Query 119097 TCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCC 119156 || | || ||||| | | || | ||||| | |||||| || ||||| ||||| Sbjct 17664 TCCTTACCGTGATTCTTCCTGATATCGATGAAGTCAAAGATATCTGCATGCCAAGGTTCT 17723 Query 119157 AGGTACACCGCGATTG-ACCCCTTACGACG--ACCAGCCTGGTTTACATACCTCGCAGTG 119213 | ||| | || || | ||| | | |||| | |||| |||||||| ||||| Sbjct 17724 AAGTAGATAGCAATGGCACCTGGTCTCTTGTTACCACCTTGGTCAACATACCTAGCAGTA 17783 Query 119214 GCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAA-- 119271 ||| || ||||||| ||| ||||| ||||||| |||| || || || || || Sbjct 17784 CTGTTGAACACACGAACCATAGGAATAATACCATTGGATGTACCGTTGGTACCAGCAATG 17843 Query 119272 TACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTG 119331 || || || | | | | | || || || | ||||||||| || ||| ||| | Sbjct 17844 TATGAACCT--GTAGAACGAATGTTATGAATATGTAGACCAATACCACCAGCCGTCTTGG 17901 Query 119332 AGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTG 119391 | || || |||| | | | || ||||||| || || || |||||| |||| ||| Sbjct 17902 AAATCAAGGCACACTGTTTCAAAGTGTCGTAGATACCTTCAATAGAGTCATCCTTCATTG 17961 Query 119392 CGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTG 119451 | | | |||||| |||||| || || | || ||||| || || || | ||||| | Sbjct 17962 CAACTAAGAAGCAAGACGACATCTGTGGGCGTGGAGTACCGGCATTAAACAATGTTGGAG 18021 Query 119452 TCGCGTGGATGAACATACCT-TGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATG 119510 ||||| |||| || || | |||||| || || | |||||| || ||||| Sbjct 18022 AGGCGTGTGTGAA-GTATCTCTTCGACATCAAATCATACGACTCCAAAACTTTAGGAATA 18080 Query 119511 TCTTCCCCGTGAATACC 119527 || || |||||||| || Sbjct 18081 TCATCACCGTGAATTCC 18097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618427639629680