Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq14 269 3e-67 >seq14 Length=27313 Score = 269 bits (298), Expect = 3e-67 Identities = 1116/1730 (65%), Gaps = 49/1730 (3%) Strand=Plus/Minus Query 104237 ATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACATACGAC 104296 ||| | || ||| | || ||||| || || || ||| | || |||||| | || || Sbjct 18112 ATGAGAGTTGCCGTTGGAATTCACGGTGATGATATTCCTAAAGTTTTGGAGTCGTATGAT 18053 Query 104297 AAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACC 104355 |||||| | || || |||| ||||| | ||||| | || ||||| ||||| || Sbjct 18052 TTGATGTCGAAGAGATAC-TTCACACACGCCTCTCCAACATTGTTTAATGCCGGTACTCC 17994 Query 104356 AAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTAT 104415 | | || || ||||| ||||||| | | || | ||||| ||||| || | ||||| Sbjct 17993 ACGCCCACAGATGTCGTCTTGCTTCTTAGTTGCAATGAAGGATGACTCTATTGAAGGTAT 17934 Query 104416 CTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCA 104475 ||| | ||| | | ||||||| || || ||| |||||| |||||||| | || Sbjct 17933 CTACGACACTTTGAAACAGTGTGCCTTGATTTCCAAGACGGCTGGTGGTATTGGTCTACA 17874 Query 104476 CATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGG 104535 || ||| | | | | | || ||| || || || ||| ||| |||| Sbjct 17873 TATTCATAACATTCGTTCTACAGGTTCATACATTGCTGGTACCAACGGTACATCCAATGG 17814 Query 104536 TATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCG 104595 ||||||||| ||| |||| || || ||| || || | ||||| | |||| | || Sbjct 17813 TATTATTCCTATGGTTCGTGTGTTCAACAGTACTGCTAGGTATGTTGACCAAGGT-GGTA 17755 Query 104596 TCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGT 104651 | | || || | || || |||| | || || ||||| || |||||| | || | Sbjct 17754 ACAAGAGACCAGGTGCCATTGCTATCTACTTAGAACCTTGGCATGCAGATATCTTTGACT 17695 Query 104652 TCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC-CGCGATCTCTTCTCC 104710 || | || | | || || ||| | ||||| | | |||| || ||| | ||| | Sbjct 17694 TCATCGATATCAGGAAGAATCACGGTAAGGAGGA-GATCCGTGCACGTGATTTGTTCCCA 17636 Query 104711 GCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTC 104770 ||||| ||||| || ||||| ||||||||| | ||||| | | || | ||| || | Sbjct 17635 GCTCTTTGGATCCCTGATCTATTCATGAAGCGTGTTGAACAAAATGATACATGGACTTTG 17576 Query 104771 TTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTT 104830 |||| ||| |||| || ||||| || |||| ||||| ||||||||| | Sbjct 17575 TTTTCTCCTTCTGAGGCCCCAGGTCTTTCAGATGTTTATGGTGACGAGTTTGAAAAGTTG 17516 Query 104831 TACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGATG-TGTG 104889 ||||| |||||| | || || || | | || || ||| | || | |||| Sbjct 17515 TACACTCGTTACGAGAAGGAGGGACGTGGAAGAAGAACCGTTAAGGCT-CAGAAGTTGTG 17457 Query 104890 GAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGC 104949 | | ||| | || |||| || || || ||||| || | |||| ||||||| || || Sbjct 17456 GTATCAGATTTTGGAGGCTCAGACAGAAACCGGTACGCCTTTCATGATTTACAAGGATGC 17397 Query 104950 CTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTAC 105009 ||| ||| |||||||||||||||||| ||||| |||||| ||| ||| | || Sbjct 17396 CTGCAACAGAAAGAGTAATCAAAAGAACTTGGGAACCATCAAGTCTTCGAATTTGTGCTG 17337 Query 105010 AGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGC-ATCAATCG 105068 || | | || | | ||||||| | |||||||||| | || | || | | Sbjct 17336 TGAGGTTGTCGAGTACTCTTCTCCAGATGAGGTCGGTGTGTGTAACTTGGCAAACATTTG 17277 Query 105069 CTCTCCCCAAGTATGTGGA-TCCAGAGACAAAGA-CA-------TTTGATTATGAAAAAC 105119 || | || | ||| || ||| ||||| || || || | | ||| || Sbjct 17276 CT-TGCCTGCATTTGTTGAGTCC---GACAAGGATCACTGTTGGTTCAACTTTGAGAAGT 17221 Query 105120 TCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTT 105179 | ||| | | || || |||||| ||| | ||| | || ||||| || |||| | Sbjct 17220 TGCACAAGATCACCAAGGTTGTCACACGTAACTTGAACCGTGTCATTGACAGGAATTACT 17161 Query 105180 ACCCCGTT-GAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTT 105238 |||| ||| ||| || || || || || |||||| || | || || | ||| |||||| Sbjct 17160 ACCCAGTTCCAGA-GGCCCGCAACTCCAACATGAGAAACAGACCTATCGCTCTTGGTGTT 17102 Query 105239 CAGGGTCTCGCGGAT---GTATTCATTCTTTG-TCGCCACGCATTTGATTCCGACGAAGC 105294 || ||||| |||||| | ||||| || | | || ||||||| | | ||||| Sbjct 17101 CAAGGTCTTGCGGATACGTTCTTCATGCTCAGATTGC----CATTTGACTGCCCAGAAGC 17046 Query 105295 GAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGG--CGAGT 105352 || | || | ||||| |||||| |||| || | ||||| |||| | Sbjct 17045 TCGTGAGCTTAACATACAGATATTCGAGACCTTGTACCATGGTGCTCTGGAGGAATCAAA 16986 Query 105353 TCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAA 105412 |||| || | | || || ||| | || || |||| || || ||||||||||| ||| Sbjct 16985 TCAGCTTT--CTGTGGAAGAGGGTACGTACGAGACCTACGAAGGCTCTCCAGCTTC-CAA 16929 Query 105413 GGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGACTGGGAA 105469 ||| | || || | ||||||| |||| || |||| || || | || ||||| Sbjct 16928 GGGTATTCTCCAGTACGATATGT-GGAATAAGAAGCCAA-CTGATCTGTGGGATTGGGAG 16871 Query 105470 GCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATG 105529 || | |||| ||| || | |||||| | || || | | ||||| ||| Sbjct 16870 ACTTTGAAGGCCAAGATCGCTAAGGATGGTCTTAGAAATTCGCTTTTGGTCGCTCCTATG 16811 Query 105530 CCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACG 105589 ||||| ||||| ||| | || || ||||| | || || |||||||| || | ||| | Sbjct 16810 CCAACTGCCTCTACCTCTCAGATTATGGGTTACAACGAGTGCTTTGAGCCATTCACCTCT 16751 Query 105590 AACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA--CAAGCATCTCG 105647 |||||||||| ||||||| || || || ||||| ||||||||| | ||| Sbjct 16750 AACATCTATCAGAGAAGAGTTCTTGCTGGTGAGTTCCAGATTGTCAATCCTTACATGCTA 16691 Query 105648 TGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAG 105707 || ||||| | || || || | ||| | | | |||||| || |||| | | | Sbjct 16690 AGG--GACCTTATTGATATGGGAATATGGAACGATGCAATGAAGAATTTCATCATTCATG 16633 Query 105708 CGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTTGTACCGCA 105767 ||| |||||||| || | |||||||| | | |||||||| |||||| | | Sbjct 16632 ACAATGGATCCATTCAGAACTTACCTAATATTCCAGACAACATTAAGAAATTGTACAGGA 16573 Query 105768 CAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCA 105827 | ||||||||| | ||| |||||| |||||||| || || | ||| || || Sbjct 16572 CTGTTTGGGAACTTTCTCAGAAATCTGTCATCGACATGGCTGCCGACAGAGGTGCCTACA 16513 Query 105828 TTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCCAACGATGTCCAAGCTCTCTT 105887 || || |||| ||||| || | || || ||||| ||| ||| | | | Sbjct 16512 TTTGCCAGTCTCAATCCATGAACATCCACTTGCAATCGCCAACTATGGGTAAGTTGACGT 16453 Query 105888 CTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTAC 105937 | |||||| | ||| | |||||||||||| | || || || ||||| ||| Sbjct 16452 CCATGCACTTTTACGGCTGGAAGAAGGGTTTGAAGACAGGTATGTACTAC 16403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583253669636720