Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq14 269 3e-67
>seq14
Length=27313
Score = 269 bits (298), Expect = 3e-67
Identities = 1116/1730 (65%), Gaps = 49/1730 (3%)
Strand=Plus/Minus
Query 104237 ATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACATACGAC 104296
||| | || ||| | || ||||| || || || ||| | || |||||| | || ||
Sbjct 18112 ATGAGAGTTGCCGTTGGAATTCACGGTGATGATATTCCTAAAGTTTTGGAGTCGTATGAT 18053
Query 104297 AAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACC 104355
|||||| | || || |||| ||||| | ||||| | || ||||| ||||| ||
Sbjct 18052 TTGATGTCGAAGAGATAC-TTCACACACGCCTCTCCAACATTGTTTAATGCCGGTACTCC 17994
Query 104356 AAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTAT 104415
| | || || ||||| ||||||| | | || | ||||| ||||| || | |||||
Sbjct 17993 ACGCCCACAGATGTCGTCTTGCTTCTTAGTTGCAATGAAGGATGACTCTATTGAAGGTAT 17934
Query 104416 CTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCA 104475
||| | ||| | | ||||||| || || ||| |||||| |||||||| | ||
Sbjct 17933 CTACGACACTTTGAAACAGTGTGCCTTGATTTCCAAGACGGCTGGTGGTATTGGTCTACA 17874
Query 104476 CATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGG 104535
|| ||| | | | | | || ||| || || || ||| ||| ||||
Sbjct 17873 TATTCATAACATTCGTTCTACAGGTTCATACATTGCTGGTACCAACGGTACATCCAATGG 17814
Query 104536 TATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCG 104595
||||||||| ||| |||| || || ||| || || | ||||| | |||| | ||
Sbjct 17813 TATTATTCCTATGGTTCGTGTGTTCAACAGTACTGCTAGGTATGTTGACCAAGGT-GGTA 17755
Query 104596 TCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGT 104651
| | || || | || || |||| | || || ||||| || |||||| | || |
Sbjct 17754 ACAAGAGACCAGGTGCCATTGCTATCTACTTAGAACCTTGGCATGCAGATATCTTTGACT 17695
Query 104652 TCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC-CGCGATCTCTTCTCC 104710
|| | || | | || || ||| | ||||| | | |||| || ||| | ||| |
Sbjct 17694 TCATCGATATCAGGAAGAATCACGGTAAGGAGGA-GATCCGTGCACGTGATTTGTTCCCA 17636
Query 104711 GCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTC 104770
||||| ||||| || ||||| ||||||||| | ||||| | | || | ||| || |
Sbjct 17635 GCTCTTTGGATCCCTGATCTATTCATGAAGCGTGTTGAACAAAATGATACATGGACTTTG 17576
Query 104771 TTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTT 104830
|||| ||| |||| || ||||| || |||| ||||| ||||||||| |
Sbjct 17575 TTTTCTCCTTCTGAGGCCCCAGGTCTTTCAGATGTTTATGGTGACGAGTTTGAAAAGTTG 17516
Query 104831 TACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGATG-TGTG 104889
||||| |||||| | || || || | | || || ||| | || | ||||
Sbjct 17515 TACACTCGTTACGAGAAGGAGGGACGTGGAAGAAGAACCGTTAAGGCT-CAGAAGTTGTG 17457
Query 104890 GAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGC 104949
| | ||| | || |||| || || || ||||| || | |||| ||||||| || ||
Sbjct 17456 GTATCAGATTTTGGAGGCTCAGACAGAAACCGGTACGCCTTTCATGATTTACAAGGATGC 17397
Query 104950 CTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTAC 105009
||| ||| |||||||||||||||||| ||||| |||||| ||| ||| | ||
Sbjct 17396 CTGCAACAGAAAGAGTAATCAAAAGAACTTGGGAACCATCAAGTCTTCGAATTTGTGCTG 17337
Query 105010 AGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGC-ATCAATCG 105068
|| | | || | | ||||||| | |||||||||| | || | || | |
Sbjct 17336 TGAGGTTGTCGAGTACTCTTCTCCAGATGAGGTCGGTGTGTGTAACTTGGCAAACATTTG 17277
Query 105069 CTCTCCCCAAGTATGTGGA-TCCAGAGACAAAGA-CA-------TTTGATTATGAAAAAC 105119
|| | || | ||| || ||| ||||| || || || | | ||| ||
Sbjct 17276 CT-TGCCTGCATTTGTTGAGTCC---GACAAGGATCACTGTTGGTTCAACTTTGAGAAGT 17221
Query 105120 TCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTT 105179
| ||| | | || || |||||| ||| | ||| | || ||||| || |||| |
Sbjct 17220 TGCACAAGATCACCAAGGTTGTCACACGTAACTTGAACCGTGTCATTGACAGGAATTACT 17161
Query 105180 ACCCCGTT-GAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTT 105238
|||| ||| ||| || || || || || |||||| || | || || | ||| ||||||
Sbjct 17160 ACCCAGTTCCAGA-GGCCCGCAACTCCAACATGAGAAACAGACCTATCGCTCTTGGTGTT 17102
Query 105239 CAGGGTCTCGCGGAT---GTATTCATTCTTTG-TCGCCACGCATTTGATTCCGACGAAGC 105294
|| ||||| |||||| | ||||| || | | || ||||||| | | |||||
Sbjct 17101 CAAGGTCTTGCGGATACGTTCTTCATGCTCAGATTGC----CATTTGACTGCCCAGAAGC 17046
Query 105295 GAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGG--CGAGT 105352
|| | || | ||||| |||||| |||| || | ||||| |||| |
Sbjct 17045 TCGTGAGCTTAACATACAGATATTCGAGACCTTGTACCATGGTGCTCTGGAGGAATCAAA 16986
Query 105353 TCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAA 105412
|||| || | | || || ||| | || || |||| || || ||||||||||| |||
Sbjct 16985 TCAGCTTT--CTGTGGAAGAGGGTACGTACGAGACCTACGAAGGCTCTCCAGCTTC-CAA 16929
Query 105413 GGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGACTGGGAA 105469
||| | || || | ||||||| |||| || |||| || || | || |||||
Sbjct 16928 GGGTATTCTCCAGTACGATATGT-GGAATAAGAAGCCAA-CTGATCTGTGGGATTGGGAG 16871
Query 105470 GCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATG 105529
|| | |||| ||| || | |||||| | || || | | ||||| |||
Sbjct 16870 ACTTTGAAGGCCAAGATCGCTAAGGATGGTCTTAGAAATTCGCTTTTGGTCGCTCCTATG 16811
Query 105530 CCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACG 105589
||||| ||||| ||| | || || ||||| | || || |||||||| || | ||| |
Sbjct 16810 CCAACTGCCTCTACCTCTCAGATTATGGGTTACAACGAGTGCTTTGAGCCATTCACCTCT 16751
Query 105590 AACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA--CAAGCATCTCG 105647
|||||||||| ||||||| || || || ||||| ||||||||| | |||
Sbjct 16750 AACATCTATCAGAGAAGAGTTCTTGCTGGTGAGTTCCAGATTGTCAATCCTTACATGCTA 16691
Query 105648 TGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAG 105707
|| ||||| | || || || | ||| | | | |||||| || |||| | | |
Sbjct 16690 AGG--GACCTTATTGATATGGGAATATGGAACGATGCAATGAAGAATTTCATCATTCATG 16633
Query 105708 CGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTTGTACCGCA 105767
||| |||||||| || | |||||||| | | |||||||| |||||| | |
Sbjct 16632 ACAATGGATCCATTCAGAACTTACCTAATATTCCAGACAACATTAAGAAATTGTACAGGA 16573
Query 105768 CAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCA 105827
| ||||||||| | ||| |||||| |||||||| || || | ||| || ||
Sbjct 16572 CTGTTTGGGAACTTTCTCAGAAATCTGTCATCGACATGGCTGCCGACAGAGGTGCCTACA 16513
Query 105828 TTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCCAACGATGTCCAAGCTCTCTT 105887
|| || |||| ||||| || | || || ||||| ||| ||| | | |
Sbjct 16512 TTTGCCAGTCTCAATCCATGAACATCCACTTGCAATCGCCAACTATGGGTAAGTTGACGT 16453
Query 105888 CTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTAC 105937
| |||||| | ||| | |||||||||||| | || || || ||||| |||
Sbjct 16452 CCATGCACTTTTACGGCTGGAAGAAGGGTTTGAAGACAGGTATGTACTAC 16403
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583253669636720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |