Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq423 129 7e-25
seq14 129 7e-25
seq208 120 3e-22
seq187 100 3e-16
>seq423
Length=50725
Score = 129 bits (142), Expect = 7e-25
Identities = 161/221 (73%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 27388 GCCAGAAATATTACTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACT 27447
|||||| || ||| | ||||||||| || || ||||| | ||||| ||||| || ||
Sbjct 3841 GCCAGATATCTTATCAAAATGCAAATTTTCGTTAAGACTTTGACCGGTAAGACCATCACC 3782
Query 27448 CTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAG 27507
|||||||||||||| || | |||| ||| | || || || || |||||||||
Sbjct 3781 CTTGAGGTTGAGTCTTCCGACACTATTGACAATGTCAAACAAAAGATCCAAGACAAGGAG 3722
Query 27508 GGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGT 27567
|||||||| || || |||||| | | || |||||||||||||| | ||||| | |
Sbjct 3721 GGAATTCCACCTGATCAGCAGAGATTGATCTTTGCTGGTAAGCAGTTGGAGGACGGCAGA 3662
Query 27568 ACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCA 27608
|| | | ||||| || | || ||||| |||||||||||
Sbjct 3661 ACTTTGTCTGACTACAACATTCAGAAGGAGTCCACTCTTCA 3621
>seq14
Length=27313
Score = 129 bits (142), Expect = 7e-25
Identities = 781/1243 (63%), Gaps = 41/1243 (3%)
Strand=Plus/Plus
Query 80541 CCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGG 80600
|||||| |||| ||| | || |||| || || ||||| || || | ||||||||||
Sbjct 16904 CCACATATCGTACTGGAGAATACCCTTGGAAGCTGGAGAGCCTTCGTAGGTCTCGTACGT 16963
Query 80601 GCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAA 80660
||||| | | |||| | || ||| || || | || || | | ||| ||
Sbjct 16964 ACCCTCTTCCACAGAAAGCTGATTTGATTCCTCCAGAGCACCATGGTACAAGGTCTCGAA 17023
Query 80661 GACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAA 80720
| |||| | | || || | |||| ||| || | ||| | | ||| | |||
Sbjct 17024 TATCTGTATGTTAAGCTCACGAGCTTCTGGGCAGTCAAATGGCAATCTGAGCATGAAGAA 17083
Query 80721 CACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGA-TCGCT 80779
| || || || || ||||| || | ||||| || | || | | |||| || | ||
Sbjct 17084 CGTATCCGCAAGACCTTGAACACCAAGAGCGATAGGTCTGTTTCTCATGTTGGAGTTGCG 17143
Query 80780 CGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAA 80839
|||||| |||| |||||| | || | || ||||| ||||||| ||| ||||| ||||
Sbjct 17144 -GGCCTCTGGAACTGGGTAGTAATTCCTGTCAATGACACGGTTCAAGTTACGTGTGACAA 17202
Query 80840 CCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTG-----GTTCCCCTTC-------A 80887
|| || | | || | |||| ||||| ||| | ||| || |
Sbjct 17203 CCTTGGTGATCTTGTGCAACTTCTCAAAGTTGAACCAACAGTGATCCTTGTCGGACTCAA 17262
Query 80888 CAAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAA 80947
||||||| || | || | | |||| || ||||| | ||||| || | | |
Sbjct 17263 CAAATGCAGGCAAGCAAATGTTTGCCAAGTTACACACACCGACCTCATCTGGAGAAGAGT 17322
Query 80948 ACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTG 81007
||||||| | || ||||||||| |||||||| || || |||| ||| || || ||
Sbjct 17323 ACTCGACAACCTCACAGCACAAATTCGAAGACTTGATGGTTCCCAAGTTCTTTTGATTAC 17382
Query 81008 ACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACT 81067
||| |||||| || |||||||| |||| | || |||||||| || ||| | ||
Sbjct 17383 TCTTTCTGTTGCAGGCATCCTTGTAAATCATGAAAGGCGTACCGGTTTCTGTCTGAGCCT 17442
Query 81068 TGAGGATGGCGTCCCAAATCTCGCGCGCCTTGAC----CACCTTGCGGAATTTGCCTTCG 81123
| || | ||| | || | ||||| || | ||| | | | ||| |
Sbjct 17443 CCAAAATCTGATACCACAACTTCTGAGCCTTAACGGTTCTTCTTCC---ACGTCCCTCCT 17499
Query 81124 GCCACATACTTGGCGTA-AGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGG 81182
| | || | ||| | ||| || |||| | |||| | || || | || ||||
Sbjct 17500 TCT-CGTAACGAGTGTACAACTTT-TCAAACTCGTCACCATAAACATCTGAAAGACCTGG 17557
Query 81183 GCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGC---CTTCATGAA 81239
| ||| ||| | | || ||| || || || | | || | |||||||||
Sbjct 17558 GGCCTCAGAAGGAGAAAACAAAGTCCAT---GTATCATTTTGTTCAACACGCTTCATGAA 17614
Query 81240 AGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCT 81298
||||||||||| || || | ||||| || || ||| || |||||| | ||| |
Sbjct 17615 TAGATCAGGGATCCAAAGAGCTGGGAACAAATCACGTGCA-CGGATCTCCTCCTTACCGT 17673
Query 81299 GGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGG 81358
| || | | |||| ||||| | ||| || |||||||| || || | || | |
Sbjct 17674 GATTCTTCCTGATATCGATGAAGTCAAAGATATCTGCATGCCAAGGTTCTAAGTAGATAG 17733
Query 81359 CGATCGACCC------CTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAA 81412
| || | || |||| || |||| |||| || || | ||||| ||| |
Sbjct 17734 CAATGGCACCTGGTCTCTTGTTAC---CACCTTGGTCAACATACCTAGCAGTACTGTTGA 17790
Query 81413 ATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACC 81472
| ||||| | |||||| || ||||||| || |||||| ||||| | || || |
Sbjct 17791 ACACACGAACCATAGGAATAATACCATTGGATGTACCGTTGGTACCAGCAATGTATGAAC 17850
Query 81473 CCTTGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAG 81532
| | | || | || || ||||| || ||||| | | ||| |||||| |
Sbjct 17851 CTGTAGAACGAATGTTATGAATATGTAGACCAATACCACCAGCCGTCTTGGAAATCAAGG 17910
Query 81533 CACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGA 81592
||||| | |||| || || || || || || || || | ||||| ||| ||||
Sbjct 17911 CACACTGTTTCAAAGTGTCGTAGATACCTTCAATAGAGTCATCCTTCATTGCAACTAAGA 17970
Query 81593 AACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAA 81652
| || |||||||| |||| | | |||||||| |||| |||||| | |||||
Sbjct 17971 AGCAAGACGACATCTGTGGGCGTGGAGTACCGGCATTAAACAATGTTGGAGAGGCGTGTG 18030
Query 81653 TGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGT 81712
|||| || | || ||||||| ||||| | ||| || |||||||| |||||||
Sbjct 18031 TGAAGTATCTCTTCGACATCAAATCATACGACTCCAAAACTTTAGGAATATCATCACCGT 18090
Query 81713 GAATACCGATAGCTACACGCATAAACATGTACTGGGGCGTCTC 81755
|||| || | || || | ||||| | | ||| ||| ||||
Sbjct 18091 GAATTCCAACGGCAACTCTCATAAGAAGATGCTGAGGCCTCTC 18133
Score = 86.0 bits (94), Expect = 7e-12
Identities = 139/195 (71%), Gaps = 4/195 (2%)
Strand=Plus/Plus
Query 80032 GCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGC 80091
||| | || |||| |||||||| || ||||| | ||||||||||||||||| | ||||
Sbjct 16389 GCCTGTGTACGCAAGTAGTACATACCTGTCTTCAAACCCTTCTTCCAGCCGTAAAAGTGC 16448
Query 80092 ATAGAACTGAGCTT-CGCA-AGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACT 80149
|| || | | ||| | || ||| ||| | | | || | |||||||| || |||||||
Sbjct 16449 ATGGACGTCAACTTACCCATAGT-TGGCGAT-TGCAAGTGGATGTTCATGGATTGAGACT 16506
Query 80150 GACAGATGAAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCC 80209
| || ||| | || || | || || ||||| || || | || || || | || |||||
Sbjct 16507 GGCAAATGTAGGCACCTCTGTCGGCAGCCATGTCGATGACAGATTTCTGAGAAAGTTCCC 16566
Query 80210 ATACTGTACGATACA 80224
| || || | ||||
Sbjct 16567 AAACAGTCCTGTACA 16581
>seq208
Length=10633
Score = 120 bits (132), Expect = 3e-22
Identities = 155/214 (72%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||||||| || || ||||| | || || |||||||| || | ||||| |||||
Sbjct 9679 AATGCAAATTTTCGTTAAGACCTTGACGGGTAAGACTATCACCTTGGAGGTGGAGTCTTC 9620
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | ||||| ||| | ||| || || ||||| ||||||||||| || || || ||
Sbjct 9619 AGACACCATTGACAATGTCAAGCAAAAGATCCAGGATAAGGAGGGAATCCCACCTGATCA 9560
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|||| | | || ||||| |||||||| | ||||||| | || | | ||||| ||
Sbjct 9559 GCAGAGATTGATCTTTGCCGGTAAGCAGTTGGAGGATGGCAGAACTTTGTCTGACTACAA 9500
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|||||||||| || |||||||| | ||||||
Sbjct 9499 CATCCAAAAGGAGTCAACTCTTCACTTGGTCTTG 9466
>seq187
Length=11729
Score = 100 bits (110), Expect = 3e-16
Identities = 350/542 (65%), Gaps = 22/542 (4%)
Strand=Plus/Minus
Query 80533 CTGTGACCCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTC 80592
||||| ||||||||||||| ||| | | || | | |||||| || ||| ||| |||
Sbjct 3013 CTGTG-CCCCACATGTCGTACTGGAGAACCCCGTTTGCCGCCGGGGAGCCCCAGAATGTC 2955
Query 80593 TCGTACGGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATG 80652
|| ||||||||| | |||||| || ||||| ||||||||||| || |||
Sbjct 2954 GAATAAGGGCCCTCCCGCCGGGCCAGGTCCGCCGACTGGTCCAGGGCCGCGTGGTAGATG 2895
Query 80653 CACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATC 80712
|| |||| | | ||||| | | ||||| || ||| | | |||| | | || |
Sbjct 2894 GTCTGGAAGATGGCTTTGTTGAGGCGGCGCGACTCAGGGCTGCCAAACGCGTACCGCAGC 2835
Query 80713 ATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTC 80772
| | || |||| ||||||||||| || || | || | || | ||| ||| |||||
Sbjct 2834 CTGAAAAAAGCGTCTGCCAGGCCCTGGACACCAACTGCAACGGGCCTGTGCCGCGTGTTC 2775
Query 80773 GATCGCTCGGC-CTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCG 80831
|| | ||| || ||| | ||||| || || |||||||| ||||||||
Sbjct 2774 GA-CACTCTGCACTCGTCCAGAGGGTACGCACCCACGTCTATCACGCGGTTGAGGTTGCG 2716
Query 80832 TGTAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAA------------TTG--- 80876
|| || | ||||| ||||| || || | || ||| |||
Sbjct 2715 GACAAGCACTCTGACCACATCGTGAAGCTTGTGCAGGTTGAAAAAAAGGCCTCCTTGCCC 2656
Query 80877 GTTCCCCTTCACAAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTC 80936
|| ||| |||||| ||| | | | || | || |||||||| || | ||| ||
Sbjct 2655 GTCGTCCTCCACAAACATCGGCAACCCGACCGAGCCGAGGTTGCACACCGCGATCTCATC 2596
Query 80937 --AGCATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGG 80994
||| || ||||||| | || ||| | ||| || ||||| || || || |||
Sbjct 2595 CTTGCACGAGT--ACTCGACCACCTCGCAGCAGAGATTCGACGACTTGATCGTGCCGAGG 2538
Query 80995 TTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTC 81054
|| |||||||| | || |||||||| || || |||||| ||| |||| || || |||
Sbjct 2537 TTCTTCTGGTTGCATTTCGCGTTGCACGCATCTTTGTAGAGCATAAACGGTGTCCCAGTC 2478
Query 81055 TC 81056
||
Sbjct 2477 TC 2476
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570303427955360
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