Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq423 140 3e-28
seq208 104 2e-17
>seq423
Length=50725
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || ||| ||||||| ||| | || || ||||| || || | |||
Sbjct 3823 ATGCAAATTTTCGTTAAGACTTTGACCGGTAAGACCATCACCCTTGAGGTTGAGTCTTCC 3764
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||||||||| || |||||||| || || || ||||| |||||
Sbjct 3763 GACACTATTGACAATGTCAAACAAAAGATCCAAGACAAGGAGGGAATTCCACCTGATCAG 3704
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | || || || || ||||| ||| | || | || || ||||||
Sbjct 3703 CAGAGATTGATCTTTGCTGGTAAGCAGTTGGAGGACGGCAGAACTTTGTCTGACTACAAC 3644
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||||| |||||||| || | || ||||||||| | ||| | |||||
Sbjct 3643 ATTCAGAAGGAGTCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGG 3597
>seq208
Length=10633
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || || |||| || ||| |||| || | || ||||| | ||
Sbjct 9678 ATGCAAATTTTCGTTAAGACCTTGACGGGTAAGACTATCACCTTGGAGGTGGAGTCTTCA 9619
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| ||||| || || || || || || || ||||| |||||
Sbjct 9618 GACACCATTGACAATGTCAAGCAAAAGATCCAGGATAAGGAGGGAATCCCACCTGATCAG 9559
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | ||||| || || ||||| || | || | || || ||||||
Sbjct 9558 CAGAGATTGATCTTTGCCGGTAAGCAGTTGGAGGATGGCAGAACTTTGTCTGACTACAAC 9499
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||||||||| || | || ||||| ||| | ||| | || || ||
Sbjct 9498 ATCCAAAAGGAGTCAACTCTTCACTTGGTCTTGAGATTGAGAGGAGGTAT 9449
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434913083122560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |