Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq423 143 6e-29
seq208 143 6e-29
seq257 84.2 5e-11
>seq423
Length=50725
Score = 143 bits (158), Expect = 6e-29
Identities = 156/207 (75%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||||||||||||||| || || ||||| || || | | || || || || |||| |||
Sbjct 3620 GTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGACAAAGTTCTGCCGTCCTCCAACTG 3679
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || || ||||| | | || || ||||| |||| ||| |||||||| ||||||||
Sbjct 3680 CTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGGAATTCCCTCCTTGTCTTGGATCTT 3739
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
|||||| || || || || ||||| || |||||||| || ||||| ||||| || ||
Sbjct 3740 TTGTTTGACATTGTCAATAGTGTCGGAAGACTCAACCTCAAGGGTGATGGTCTTACCGGT 3799
Query 211091 GAGAGTCTTTACAAACACCTGCATTTT 211117
| |||||| || || | ||||||||
Sbjct 3800 CAAAGTCTTAACGAAAATTTGCATTTT 3826
>seq208
Length=10633
Score = 143 bits (158), Expect = 6e-29
Identities = 163/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | ||||||||| ||||| ||||||||||| || || | | || || ||
Sbjct 9463 TCTCAAGACCAAGTGAAGAGTTGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCC 9522
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||| |||| |||||| || || ||||| | | || || ||||| || | ||| |||||
Sbjct 9523 ATCCTCCAACTGCTTACCGGCAAAGATCAATCTCTGCTGATCAGGTGGGATTCCCTCCTT 9582
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
|||||||||||||| || || || || |||||||| || || ||||| | |||||
Sbjct 9583 ATCCTGGATCTTTTGCTTGACATTGTCAATGGTGTCTGAAGACTCCACCTCCAAGGTGAT 9642
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
||||| ||||| | ||||| || || | ||||||||
Sbjct 9643 AGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCATTTT 9681
>seq257
Length=61483
Score = 84.2 bits (92), Expect = 5e-11
Identities = 76/96 (79%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 139807 CTTCCAAAGAAGCACGGAAGAGGAGGACAATCTGCTCTGCGTTTTGAAAGACTTCGAAAG 139866
|||||||||||||| |||||||| || ||||||||| | ||||||| ||| | ||| |
Sbjct 60376 CTTCCAAAGAAGCATGGAAGAGGTGGTCAATCTGCTGTTCGTTTTGCCAGATTAAGAATG 60317
Query 139867 GAAAAGAGGCACAACTACTTGAGAAAAGTTGCAGAG 139902
|| ||||| || || || | ||||| ||||| |||
Sbjct 60316 GAGAAGAGACATAATTATATTAGAAAGGTTGCCGAG 60281
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159137475100970
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |