Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq208 93.3 3e-14 seq423 82.4 6e-11 >seq208 Length=10633 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| |||||| || |||| ||| | |||||| || ||||| || ||||| || | | Sbjct 9452 CCTCCTCTCAATCTCAAGACCAAGTGAAGAGTTGACTCCTTTTGGATGTTGTAGTCAGAC 9511 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | |||| || ||| ||||| || || || ||| | || | || || || || || Sbjct 9512 AAAGTTCTGCCATCCTCCAACTGCTTACCGGCAAAGATCAATCTCTGCTGATCAGGTGGG 9571 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTT 101191 | || || || || || ||||| || |||| | | | || |||| ||| Sbjct 9572 ATTCCCTCCTTATCCTGGATCTTTTGCTTGACATTGTCAATGGTGTCTGAAGACTCCACC 9631 Query 101192 TCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCATTATT 101242 || | ||| ||||| || |||||||| || |||| |||||||||||| || Sbjct 9632 TCCAAGGTGATAGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCATTTTT 9682 >seq423 Length=50725 Score = 82.4 bits (90), Expect = 6e-11 Identities = 164/243 (67%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 101009 TTGCCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCG 101068 || || |||| |||||| || |||| ||| | ||| || || || ||||| ||||| || Sbjct 3594 TTACCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCA 3653 Query 101069 GCCATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACG 101128 | || |||| || || ||||| || || || ||| | || | || || || || Sbjct 3654 GACAAAGTTCTGCCGTCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGT 3713 Query 101129 GGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT 101188 || | || || ||||| || |||||||| |||| | | | || || | ||| Sbjct 3714 GGAATTCCCTCCTTGTCTTGGATCTTTTGTTTGACATTGTCAATAGTGTCGGAAGACTCA 3773 Query 101189 GTTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCATTATTACAATA 101248 || | ||| || || || || ||||| || |||| |||||||||||| | | || | Sbjct 3774 ACCTCAAGGGTGATGGTCTTACCGGTCAAAGTCTTAACGAAAATTTGCATTTTGATAAGA 3833 Query 101249 TAT 101251 ||| Sbjct 3834 TAT 3836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409655917099302