Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq290 259 4e-64
>seq290
Length=58723
Score = 259 bits (286), Expect = 4e-64
Identities = 608/905 (67%), Gaps = 27/905 (3%)
Strand=Plus/Plus
Query 4247 AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAA 4306
||||||| || ||||| || || |||| ||| || ||||| ||||| || || | ||
Sbjct 52787 AACACCAGCCTTCTGGTAGTCAGAAACTCTCTTCTCAAAGAAGTTAGTCTTACCAGCCAA 52846
Query 4307 CGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAG 4366
||||| || |||||||| || || ||||| || || |||||| ||| ||||| |
Sbjct 52847 GGAAATGTTCTCCATAAAGTCGAATGGATTGGTAGCATTGTAAACTTTCTCACATCCCAA 52906
Query 4367 AGCTACAAGCAATCGGTCAGCTACA-AATTCTATATACTGGCTCATGAGTTCGCAGTTAA 4425
||| | |||||||| ||| || ||| ||||| | ||| ||| ||| | ||| |||| |
Sbjct 52907 AGCAATAAGCAATCTGTCGGC-ACAGAATTCAACATAATGGGCCATCATATCGAAGTTCA 52965
Query 4426 TTCCAATTAATCTCACAGGTAGCGCGTATGTCAA-AAACTCTTGTTCTATAGTTACGGCT 4484
| |||| || || || || || | || | ||| |||| | | ||| | || ||
Sbjct 52966 TACCAAGCAAAGAAACTGGGAGAGCATCACTCCAGAAAGTCTTCT-CAATATTGACAGCC 53024
Query 4485 TCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAAT 4544
|| || || || | || || || | ||| ||| || || | |||||
Sbjct 53025 TCGGTCATAATTTTCTTAATAATAACCTTACTAGGTGGATGCTTCAAATGAGAGAACAAG 53084
Query 4545 AAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTT 4604
| || || |||||| ||| | ||| || || |||| ||| || || || || || ||
Sbjct 53085 AGGCATGCGAAATCAGTATGTAGACCCTCATCCCTGCAAATAAGCTCATTGGAGAAGGTA 53144
Query 4605 AATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAG 4664
| ||| ||||| ||||||||||| || | ||| || |||| |||||| || ||||| |||
Sbjct 53145 AGTCCAGGCATCAAACCTCTCTTCTTCAACCAGAAGATAGAGGCAAACGAGCCAGAGAAG 53204
Query 4665 AATATGCCTTCTACGGCGGCAAACGCTACTAATCG----GGACCCGAACGAGCTGGCTTT 4720
|| | || || | ||| ||||| || || |||| | | | || | | | ||
Sbjct 53205 AAAACACCCTCGATGGCAGCAAAGGCGACCAATCTCTCAGCATACAAAGCATCAT-CATT 53263
Query 4721 GTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATAT 4780
|| | |||||| | || ||||| ||| |||| ||||| ||||| || | ||
Sbjct 53264 GTTT---ATCCATCTCAAAGCCCATAGAGCCTTTTCCTTAATAGGTGGAATGGTATGGAT 53320
Query 4781 AGCGTTAAATAATTT-----ACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGT 4835
||| || || || | ||| || | | ||| || || || || | ||
Sbjct 53321 AGCATTGAACAAGTAGTCGGACTCCTT-CTTGTCGGTGATG----TACGTTTCAAGTAAA 53375
Query 4836 AGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTA 4895
||| || | ||||| || || || || | |||||| || ||||||||| |||
Sbjct 53376 AGGGAGTAGGTCTCAGAGTGGATGTTCTCAACCATAATCTGGAAACCGTAAAAGGCTCTT 53435
Query 4896 GCTTCTGTTACTTGAACTTCGTT-ACAAAATCTTTCTACTAAGTTTTCGTTTACTATACC 4954
||||||| || |||||| | || | |||| ||| | | ||||| |||| || |||||
Sbjct 53436 GCTTCTGGTAATTGAACCTGCTTCATGAAAT-TTTGTGCCAAGTTCTCGTCAACAATACC 53494
Query 4955 GTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTA---CTGTTCGTCAGGCTT 5011
||| || |||||||| ||||||||| | ||||||||||| || | | || | |
Sbjct 53495 ATCAGAAGCGGCAAAAAATGCCAAAACACGCGATATAAAGTATCTCTCGTTGGCATTCAT 53554
Query 5012 AAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGA 5071
|| ||||||| | ||| || |||| | ||||| || ||| |||||||||| ||
Sbjct 53555 CTTGTTGTTCCAGTCAGTCAAGTCCTTAGAGAGATCAATCTCCTCAGCAGTCCAAAAAGA 53614
Query 5072 CGCTTCCGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAA 5131
|| ||||| || || ||||| ||| |||||| |||||||| || | || |||||
Sbjct 53615 GGCCTCCGCCTTCTTATACATTTGCCATATATCATCGTACTGAATAGGGAACATCACAAA 53674
Query 5132 TCTGT 5136
|||||
Sbjct 53675 TCTGT 53679
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427044509835674
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |