Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq290 235 8e-57
seq14 187 3e-42
>seq290
Length=58723
Score = 235 bits (260), Expect = 8e-57
Identities = 576/865 (67%), Gaps = 16/865 (2%)
Strand=Plus/Plus
Query 47871 TTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATAAAATCAAATGGATTA 47930
||||| || || ||||| || || |||| || || || |||||||| || ||||||||
Sbjct 52818 TTCTCAAAGAAGTTAGTCTTACCAGCCAAGGAAATGTTCTCCATAAAGTCGAATGGATTG 52877
Query 47931 ACTGCATTATAAAtttttttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCT 47990
||||| |||| ||| | | |||| || | || || ||| || ||| ||||||
Sbjct 52878 GTAGCATTGTAAACTTTCTCACATCCCAAAGCAATAAGCAATCTGTCGGCACAGAATTCA 52937
Query 47991 ATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGTA 48050
| ||| |||||| || | ||||| || | | |||||| ||||| || |
Sbjct 52938 ACATAATGGGCCATCATATCGAAGTTCATACCAAGCAAAGAAACTGGGAGAGCATCACTC 52997
Query 48051 -AGAAACTCTTGTTCGATAGTGACAGCATC---CACTATTATCGATGTTACCGTTTCCTC 48106
||||| |||| | | ||| ||||||| || || ||| || | | | |||
Sbjct 52998 CAGAAAGTCTTCT-CAATATTGACAGCCTCGGTCATAATTTTCTTAATAA---TAACCTT 53053
Query 48107 ACTTGGTGGATACAACAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTC 48166
||| ||||||| | |||||| |||| | ||||| |||||| ||| ||||| ||
Sbjct 53054 ACTAGGTGGATGCTTCAAATGAGAGAACAAGAGGCATGCGAAATCAGTATGTAGACCCTC 53113
Query 48167 ATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAG 48226
||| || | ||| | || || || || || || || ||||| | || | || || |
Sbjct 53114 ATCCCTGCAAATAAGCTCATTGGAGAAGGTAAGTCCAGGCATCAAACCTCTCTTCTTCAA 53173
Query 48227 CCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGT 48286
||| || || | || || || ||||| ||||| | || || | ||| ||||| |||
Sbjct 53174 CCAGAAGATAGAGGCAAACGAGCCAGAGAAGAAAACACCCTCGATGGCAGCAAAGGCGAC 53233
Query 48287 AAGTCTCTCTCCGTAACTGGCTTCGT---TGTGTATCCACCGTTGTGCCCAATCAGCCTT 48343
| |||||| | || || || | ||| |||||| | ||||| ||||||
Sbjct 53234 CAATCTCTCAGCATACAAAGCATCATCATTGTTTATCCATCTCAAAGCCCATAGAGCCTT 53293
Query 48344 CTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATC 48403
| ||| | | || || || | |||||||| || | ||| || || | ||
Sbjct 53294 TTCCTTAATAGGTGGAATGGTATGGATAGCATTGAACAAGTAGTCGGACTCCTTCTTGTC 53353
Query 48404 TTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCAT 48463
| | ||| || || | |||||| || | || ||||| || || |||| ||
Sbjct 53354 GGTGATGTACGTTTCAAGTAAAAGGGAGTAGGTCTCAGAGTGGATGTTCTCAACCATAAT 53413
Query 48464 CTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGT-ACAAAATCGTTCAG 48522
||| || |||||||| ||| ||||||| | || |||| | | | |||| || |
Sbjct 53414 CTGGAAACCGTAAAAGGCTCTTGCTTCTGGTAATTGAACCTGCTTCATGAAATT-TTGTG 53472
Query 48523 CCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAA 48582
|||| ||||| | || || |||||| ||| ||||||||||| || ||| | ||||
Sbjct 53473 CCAAGTTCTCGTCAACAATACCATCAGAAGCGGCAAAAAATGCCAAAACACGCGATATAA 53532
Query 48583 AATATTTTTCGTTGGAAGTCA---GTTTATTCCAGTCATTGATATCTTTTGATATATCTA 48639
| ||| | ||||||| | ||| || ||||||||| | | || || || | ||| |
Sbjct 53533 AGTATCTCTCGTTGGCATTCATCTTGTTGTTCCAGTCAGTCAAGTCCTTAGAGAGATCAA 53592
Query 48640 CTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACTGT 48699
|| ||||| |||||||| || ||||| || || |||||||| | |||||||||| ||
Sbjct 53593 TCTCCTCAGCAGTCCAAAAAGAGGCCTCCGCCTTCTTATACATTTGCCATATATCATCGT 53652
Query 48700 ATTGGATTGGGAAAATAACAAATCT 48724
| || || ||||| || ||||||||
Sbjct 53653 ACTGAATAGGGAACATCACAAATCT 53677
>seq14
Length=27313
Score = 187 bits (206), Expect = 3e-42
Identities = 730/1134 (64%), Gaps = 18/1134 (2%)
Strand=Plus/Plus
Query 77757 TTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATA 77816
||||| || |||| || | ||| || |||||| | ||||| | ||||| |||| ||
Sbjct 17355 TTGATGGTTCCCAAGTTCTTTTGATTACTCTTTCTGTTGCAGGCATCCTTGTAAATCATG 17414
Query 77817 AACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACT-CT-AGCTT 77874
|| || || |||||||| |||| | || | ||| | ||| | ||| || ||| |
Sbjct 17415 AAAGGCGTACCGGTTTCTGTCTGAGCCTCCAAAATCTGATACCACA--ACTTCTGAGCCT 17472
Query 77875 TTATCATAGATTTGTATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCAT 77934
| | | | | || | ||| | || || |||| || | | |||||| || |
Sbjct 17473 TAACGGTTCTTCTTCCACGTCCCTCCTTCTCGTAACGAGTGTACAACTTTTCAAACTCGT 17532
Query 77935 CTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCAT 77994
| || ||||||| | || ||| ||| || | | ||| | ||| | |||
Sbjct 17533 CACCATAAACATCTGAAAGACCTGGGGCCTCAGAAGGAGAAAACAAAGTCCATGTATCAT 17592
Query 77995 CTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGG 78054
|| | ||| || ||||| || |||||||| ||||| ||||| || | ||| || |
Sbjct 17593 TTTGTTCAACACGCTTCATGAATAGATCAGGGATCCAAAGAGCTGGGAACAAATCACGTG 17652
Query 78055 TTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAAT 78114
| || || || || |||||| | | ||||| || || | ||||| | ||
Sbjct 17653 CACGGATCTCCTCCTTACCGTGATTCTTCCTGATATCGATGAAGTCAAAGATATCTGCAT 17712
Query 78115 GCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATAT 78174
|||| ||||||| || || || || | || |||| || ||||| || || || | ||
Sbjct 17713 GCCAAGGTTCTAAGTAGATAGCAATGGCACCTGGTCTCTTGTTACCACCTTGGTCAACAT 17772
Query 78175 ATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTG 78234
| || || || | || | || | | ||| ||||||||||| || ||||| || || |
Sbjct 17773 ACCTAGCAGTACTGTTGAACACACGAACCATAGGAATAATACCATTGGATGTACCGTTGG 17832
Query 78235 TTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTG 78294
| |||| ||| || || | | ||||| ||| ||| || || || || || |
Sbjct 17833 TACCAGCAATGTATGAACCTGTAGAACGAATGTTATGAATATGTAGACCAATACCACCAG 17892
Query 78295 CCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCAT 78354
|| |||| || || | || || ||||||| || ||||||||||| || ||| |||||
Sbjct 17893 CCGTCTTGGAAATCAAGGCACACTGTTTCAAAGTGTCGTAGATACCTTCAATAGAGTCAT 17952
Query 78355 CCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATA 78414
|| |||| || | || || ||||| || | | ||| || |||||||| |
Sbjct 17953 CCTTCATTGCAACTAAGAAGCAAGACGACATCTGTGGGCGTGGAGTACCGGCATTAAACA 18012
Query 78415 ATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTG 78474
|||| ||||| || || || || || | | || | | || || | || | | ||
Sbjct 18013 ATGTTGGAGAGGCGTGTGTGAAGTATCTCTTCGACATCAAATCATACGACTCCAAAACTT 18072
Query 78475 ATTCTATGTC-CCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTT 78533
|| || || | |||||||| || || || | ||| | | ||||||||| ||
Sbjct 18073 TAGGAATATCATCACCG-TGAATTCCAACGGCAACTCTCATAAGAAGATGCTGAGGCCTC 18131
Query 78534 TCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAA 78593
|| | |||| |||||| |||||| ||||| || | || ||||| |||||
Sbjct 18132 TCTGCAACCTTACCATTTATCCTCAACAGATATGAACGCTCTAGGGTCTTAAAGCCAAAG 18191
Query 78594 TAGTTGTA--TGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATT 78651
||||| || ||||| || | || || |||| | || || | | ||| |||| |
Sbjct 18192 TAGTTATAGCTGAAA--TCACGGTCATAGTTAATGGCCGAGTTCAACTCATCCTTGTGCT 18249
Query 78652 TGGTAACAATATCCATG-ACAGTAGTT--GAAATAATAGGAGA-TCGTACACCATTTTTA 78707
| | ||||| | || | | | || || || ||||| || | | | |||||
Sbjct 18250 TCATGACAAT---CTTGTAAACTTCTTCAGAGATCATAGGGGATTTCTTCTGGGTTTTT- 18305
Query 78708 GGATTAACATAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTG 78767
|| ||| |||||| | | |||||| || |||||| ||| | || || || | ||||
Sbjct 18306 GGGTTATAATAGTTGTAAAGATCTTCAATAACATCAGAGAATGGCTTCTTAGTCTGCTTG 18365
Query 78768 TGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTA 78827
|| | |||||| | || | ||| || || | | |||||||||| ||||| |||||
Sbjct 18366 TGCAAATTAGAAATGGCAAGTCTGGCGGCCAAAGTAGCATAATCTGGATGAATGGTAGTC 18425
Query 78828 CAAGTGGCTGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCA 78881
| || || |||| || | ||| | || ||||| ||||| || || |||
Sbjct 18426 ATATATGCCGCAGTTTCAGCAGTTAAGTTGTCCAACTCAATAGTGGTAACACCA 18479
Score = 100 bits (110), Expect = 4e-16
Identities = 356/548 (65%), Gaps = 9/548 (2%)
Strand=Plus/Plus
Query 76803 GCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 76862
|||| | |||||| | ||||||||||| || || | |||| |||| ||||| ||
Sbjct 16386 GCGGCCTGTGTACGCAAGTAGTACATACCTGTCTTCAAACCCTTCTTCCAGCCGTAAAAG 16445
Query 76863 TGCATGCTTGTCAGTTTGGA-ATAACTAG-GATCGGCTATATGAATATTCATCGACTGAC 76920
|||||| |||| || ||| | | ||| | | || || ||||| || |||
Sbjct 16446 TGCATGGACGTCAACTTACCCATAGTTGGCGATTGC--AAGTGGATGTTCATGGATTGAG 16503
Query 76921 TTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTT 76980
|| ||| | || ||||| || || ||||| | || | | || |||| || ||
Sbjct 16504 ACTGGCAAATGTAGGCACCTCTGTCGGCAGCCATGTCGATGACAGATTTCTGAGAAAGTT 16563
Query 76981 CCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGGTTTG-TA--TTTTGAATGG 77037
|||||| ||| || | | || || || | ||||||| || | || || |||||||
Sbjct 16564 CCCAAACAGTCCTGTACAATTTCTTAATGTTGTCTGGAATATTAGGTAAGTTCTGAATGG 16623
Query 77038 AACCACCATC-TGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTT 77096
| ||| || ||| || || |||||| || |||| ||||| | | | | || |
Sbjct 16624 ATCCATTGTCATGA-ATGATGAAATTCTTCATTGCATCGTTCCATATTCCCATATCAATA 16682
Query 77097 AAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTG 77156
| | || || | | |||||| || || || || || |||| | ||||| |
Sbjct 16683 AGGTCCCTTAGCATGTAAGGATTGACAATCTGGAACTCACCAGCAAGAACTCTTCTCTGA 16742
Query 77157 TAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAA 77216
|| || ||| ||| |||| || | | || |||| |||| ||| |||| |||||
Sbjct 16743 TAGATGTTAGAGGTGAATGGCTCAAAGCACTCGTTGTAACCCATAATCTGAGAGGTAGAG 16802
Query 77217 GCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCT 77276
|||||||||||||| || ||||| | |||||| ||||||| | ||| || |
Sbjct 16803 GCAGTTGGCATAGGAGCGACCAAAAGCGAATTTCTAAGACCATCCTTAGCGATCTTGGCC 16862
Query 77277 TTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGA 77336
|| | | | ||||||||| ||||| | || || ||| | |||||| || |||
Sbjct 16863 TTCAAAGTCTCCCAATCCCACAGATCAGTTGGCTTCTTATTCCACATATCGTACTGGAGA 16922
Query 77337 ATTCCGTT 77344
|| || ||
Sbjct 16923 ATACCCTT 16930
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694660307673920
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