Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq290 253 3e-62
seq14 219 6e-52
>seq290
Length=58723
Score = 253 bits (280), Expect = 3e-62
Identities = 607/906 (67%), Gaps = 14/906 (2%)
Strand=Plus/Plus
Query 46318 TCTTGTGACATAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTT 46377
|||| || |||||| || || ||||| ||| || | ||||| || || |||||
Sbjct 52776 TCTTTTGCCATAACACCAGCCTTCTGGTAGTCAGAAACTCTCTTCTCAAAGAAGTTAGTC 52835
Query 46378 TTGCCTTCCAATGATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAttttt 46437
|| || |||| || || || |||||||| || || ||||| ||| |||| |||| |||
Sbjct 52836 TTACCAGCCAAGGAAATGTTCTCCATAAAGTCGAATGGATTGGTAGCATTGTAAACTTTC 52895
Query 46438 ttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATT 46497
| | |||| || | || || ||| || ||| |||||| | ||| ||||||
Sbjct 52896 TCACATCCCAAAGCAATAAGCAATCTGTCGGCACAGAATTCAACATAATGGGCCATCATA 52955
Query 46498 TCACAATTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGTA-AGAAACTCTTGTTCAAT 46556
|| | ||||| || | | || || ||||| || | ||||| |||| | ||||
Sbjct 52956 TCGAAGTTCATACCAAGCAAAGAAACTGGGAGAGCATCACTCCAGAAAGTCTTCT-CAAT 53014
Query 46557 AGTGACAGCATCCGATATTATCGATGTTACTGTTT-CCTCACTTGGTGGATGCATCAAAT 46615
| ||||||| || | || || | ||| | | ||| ||| ||||||||| ||||||
Sbjct 53015 ATTGACAGCCTCGGTCATAATTT-TCTTAATAATAACCTTACTAGGTGGATGCTTCAAAT 53073
Query 46616 GTTTAAACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGT 46675
| |||| | ||||| |||||| ||| || || ||||| || | ||| | || |
Sbjct 53074 GAGAGAACAAGAGGCATGCGAAATCAGTATGTAGACCCTCATCCCTGCAAATAAGCTCAT 53133
Query 46676 TAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAG 46735
| || || || || |||||||| | || | ||| || | ||| || |||| || || |
Sbjct 53134 TGGAGAAGGTAAGTCCAGGCATCAAACCTCTCTTCTTCAACCAGAAGATAGAGGCAAACG 53193
Query 46736 ATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGG 46795
| ||||| ||||| | || || | || || || ||||| | |||||| | || |
Sbjct 53194 AGCCAGAGAAGAAAACACCCTCGATGGCAGCAAAGGCGACCAATCTCTCAGCATACAAAG 53253
Query 46796 CATCATTATGA---ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTG 46852
|||||| || ||||| || |||||| |||||||| ||| | | || || |
Sbjct 53254 CATCATCATTGTTTATCCATCTCAAAGCCCATAGAGCCTTTTCCTTAATAGGTGGAATGG 53313
Query 46853 TTTCTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTA 46912
| | |||||||| || | ||| || | | || | | || || || | ||
Sbjct 53314 TATGGATAGCATTGAACAAGTAGTCGGACTCCTTCTTGTCGGTGATGTACGTTTCAAGTA 53373
Query 46913 AAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATC 46972
|||| || | || || || ||||| |||| ||||| || |||||||| ||
Sbjct 53374 AAAGGGAGTAGGTCTCAGAGTGGATGTTCTCAACCATAATCTGGAAACCGTAAAAGGCTC 53433
Query 46973 TTGCTTCAG-TAATCTGTACCT-CTGTACAAAATCGTTCAGACAAATTCTCATTCACTAT 47030
||||||| | |||| || |||| || | |||| || | ||| ||||| | || ||
Sbjct 53434 TTGCTTCTGGTAAT-TGAACCTGCTTCATGAAATT-TTGTGCCAAGTTCTCGTCAACAAT 53491
Query 47031 TCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGT 47090
|||||| ||| |||||||||||||| ||| | ||||| ||| | || | || | |
Sbjct 53492 ACCATCAGAAGCGGCAAAAAATGCCAAAACACGCGATATAAAGTATCTCTCGTTGGCATT 53551
Query 47091 CA---GTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAA 47147
|| || ||||||||| | | || || || | ||| | || ||||| ||||| ||
Sbjct 53552 CATCTTGTTGTTCCAGTCAGTCAAGTCCTTAGAGAGATCAATCTCCTCAGCAGTCCAAAA 53611
Query 47148 TGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTGGATCGGAAAAATAAC 47207
|| ||||| || || |||||||| | |||||||||| || || || || || || ||
Sbjct 53612 AGAGGCCTCCGCCTTCTTATACATTTGCCATATATCATCGTACTGAATAGGGAACATCAC 53671
Query 47208 AAATCT 47213
||||||
Sbjct 53672 AAATCT 53677
>seq14
Length=27313
Score = 219 bits (242), Expect = 6e-52
Identities = 1356/2141 (63%), Gaps = 60/2141 (3%)
Strand=Plus/Plus
Query 75373 CAACG-TGAACTGAATGGGA-GAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTT 75430
||||| |||| || |||| | ||| | || | | |||||| | ||||||||||| ||
Sbjct 16360 CAACGGTGAATTGGATGGCACGAGCA-GCGGCCTGTGTACGCAAGTAGTACATACCTGTC 16418
Query 75431 TTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGA-ATAACTCG-GAT 75488
|| | |||| |||| ||||| || |||||| || | || ||| | | |||
Sbjct 16419 TTCAAACCCTTCTTCCAGCCGTAAAAGTGCATGGACGTCAACTTACCCATAGTTGGCGAT 16478
Query 75489 CGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCA 75548
| | || || ||||| || ||| || ||| | || ||||| || || ||||
Sbjct 16479 TGC--AAGTGGATGTTCATGGATTGAGACTGGCAAATGTAGGCACCTCTGTCGGCAGCCA 16536
Query 75549 TTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCAT 75608
| | || | | || |||| || |||||||| ||| || | | || || || | |
Sbjct 16537 TGTCGATGACAGATTTCTGAGAAAGTTCCCAAACAGTCCTGTACAATTTCTTAATGTTGT 16596
Query 75609 CTGGAAGATTTG-TA--TTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCT 75665
|||||| ||| | || || ||||||||||| ||| || || |||||| ||
Sbjct 16597 CTGGAATATTAGGTAAGTTCTGAATGGATCCATTGTCATGAATGATGAAATTCTTCATTG 16656
Query 75666 CATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAA 75725
|||| ||||| | | | || | | | || || | | |||||| ||||| || |
Sbjct 16657 CATCGTTCCATATTCCCATATCAATAAGGTCCCTTAGCATGTAAGGATTGACAATCTGGA 16716
Query 75726 ATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCAT 75785
| || |||| | ||||||| || || ||| ||| |||| || | | || |
Sbjct 16717 ACTCACCAGCAAGAACTCTTCTCTGATAGATGTTAGAGGTGAATGGCTCAAAGCACTCGT 16776
Query 75786 TGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTC 75845
||| |||| ||| |||| || || ||||| |||||||| || ||||| | |||||
Sbjct 16777 TGTAACCCATAATCTGAGAGGTAGAGGCAGTTGGCATAGGAGCGACCAAAAGCGAATTTC 16836
Query 75846 TGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTA 75905
| ||||||| | ||| || | || | | | ||||||||| ||||| | |||
Sbjct 16837 TAAGACCATCCTTAGCGATCTTGGCCTTCAAAGTCTCCCAATCCCACAGATCAGTTGGCT 16896
Query 75906 CAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTT 75965
|| ||| | |||||| || ||||| || ||| ||| || || | || || |
Sbjct 16897 TCTTATTCCACATATCGTACTGGAGAATACCCTTGGAAGCTGGAGAGCCTTCGTAGGTCT 16956
Query 75966 CGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCG---CCTCTAACGCACCGTAATAAA 76022
|||| || || || | ||| || | | | | |||| | ||||| | || |
Sbjct 16957 CGTACGTACCCTCTTCCACAGAAAGCTG---ATTTGATTCCTCCAGAGCACCATGGTACA 17013
Query 76023 TTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTA 76082
|| ||||| |||| | ||||| || | ||||| | | ||||| || ||| |
Sbjct 17014 AGGTCTCGAATATCTGTATGTTAAGCTCACGAGCTTCTGGGCAGTCAAATGGC-AATCTG 17072
Query 76083 A--AAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTT 76140
| | ||| || | ||| || || || ||||| |||| | | |||||||| | |||| |
Sbjct 17073 AGCATGAAGAAC-GTATCCGCAAGACCTTGAACACCAAGAGCGATAGGTCTGTTTCTCAT 17131
Query 76141 ATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATT 76200
||||| | || ||||||| ||||| ||||| | || || | || | ||
Sbjct 17132 GTTGGAGTTGCGGGCCTCTGGAACTGGGTAGTAATTCCTGTCAATGACACGGTTCAAGTT 17191
Query 76201 TC---TGACAACT------ACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCC 76251
| ||||||| | || || | || | |||| || | | |||
Sbjct 17192 ACGTGTGACAACCTTGGTGATCTTGTGCAACTTCTCAAAGTTGAACCAAC--AGTGATCC 17249
Query 76252 ATCTATCACA-AACATATTAAG---AGCTATAGAT-GCTAGATTACAAACGGCTACCTCA 76306
| | || |||| || || ||| | | | || | ||||| || | ||||||
Sbjct 17250 TTGTCGGACTCAACAAATGCAGGCAAGCAAATGTTTGCCAAGTTACACACACCGACCTCA 17309
Query 76307 TTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGA 76366
| | | | || | | | ||| ||| | ||| | ||||||| ||||| |
Sbjct 17310 TCTGGAGAAGAGTACTCGACAACCTCACAGCACAAATTCGAAGACTTGATGGTTCCCAAG 17369
Query 76367 TTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTT 76426
|| | ||| || |||||| |||| || | ||||| |||| | || || || || |||
Sbjct 17370 TTCTTTTGATTACTCTTTCTGTTGCAGGCATCCTTGTAAATCATGAAAGGCGTACCGGTT 17429
Query 76427 TCAATCTGTGATTCGATAATAGATTTCCAGACGACT-CT-AGCTTTTATTATAGATTTGT 76484
|| |||| | || | ||| | ||| | ||| || ||| || | | || |
Sbjct 17430 TCTGTCTGAGCCTCCAAAATCTGATACCACA--ACTTCTGAGCCTTAACGGTTC--TTCT 17485
Query 76485 ATCGCTTCTCTCTTTCA--TATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATC 76542
| | || ||| ||| || | || || ||| |||||| || || || |||||||
Sbjct 17486 TCCACGTCCCTCCTTCTCGTAACGAGTGTACAACTTTTCAAACTCGTCACCATAAACATC 17545
Query 76543 ATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCG 76602
| ||| || ||| ||| | | ||| | ||| | ||| || | ||| ||
Sbjct 17546 TGAAAGACCTGGGGCCTCAGAAGGAGAAAACAAAGTCCATGTATCATTTTGTTCAACACG 17605
Query 76603 TTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTC 76662
||||| || |||||||| ||||| ||||| || | ||| || | | || ||
Sbjct 17606 CTTCATGAATAGATCAGGGATCCAAAGAGCTGGGAACAAATCACGTGCACGGATCTCCTC 17665
Query 76663 ATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAG 76722
|| || |||||| | | ||| | ||| || | ||||| | |||||| |||||||
Sbjct 17666 CTTACCGTGATTCTTCCTGATATCGATGAAGTCAAAGATATCTGCATGCCAAGGTTCTAA 17725
Query 76723 ATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTT 76782
|| || || || |||| |||| || ||||| || || || | ||| || ||||| |
Sbjct 17726 GTAGATAGCAATGGCACCTGGTCTCTTGTTACCACCTTGGTCAACATACCTAGCAGTACT 17785
Query 76783 ATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATA 76842
|| | || | | ||| |||||||| || || |||||||| || || |||| ||| ||
Sbjct 17786 GTTGAACACACGAACCATAGGAATAATACCATTGGATGTACCGTTGGTACCAGCAATGTA 17845
Query 76843 ACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGAT 76902
|| | |||||| ||| |||| ||| || || || || ||| | || || ||
Sbjct 17846 TGAACCTGTAGAACGAATGTTATGAATATGTAGACCAATACCACCAGCCGTCTTGGAAAT 17905
Query 76903 TAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAG 76962
| ||||| ||||||| ||||| ||||| || || ||| |||||| |||| ||
Sbjct 17906 CAAGGCACACTGTTTCAAAGTGTCGTAGATACCTTCAATAGAGTCATCCTTCATTGCAAC 17965
Query 76963 AAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGC 77022
| || || ||||| || | | ||| || |||||||||||||| ||||| ||
Sbjct 17966 TAAGAAGCAAGACGACATCTGTGGGCGTGGAGTACCGGCATTAAACAATGTTGGAGAGGC 18025
Query 77023 ATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATC-CC 77081
|| ||||| || | | || | | || || | || | |||| ||||| |
Sbjct 18026 GTGTGTGAAGTATCTCTTCGACATCAAATCATACGACTCCAAAACTTTAGGAATATCATC 18085
Query 77082 ATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTAT 77141
| | |||||||| || || || | ||| | | ||||||||| | ||| || ||||
Sbjct 18086 ACCG-TGAATTCCAACGGCAACTCTCATAAGAAGATGCTGAGGCCTCTCTGCAACCTTAC 18144
Query 77142 TATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGA 77199
|||||| |||||| ||||| || | || ||||| ||||| ||||| || |||
Sbjct 18145 CATTTATCCTCAACAGATATGAACGCTCTAGGGTCTTAAAGCCAAAGTAGTTATAGCTGA 18204
Query 77200 AAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAACAATATC 77259
|| || | || || |||| |||| || | | ||||| | || | |||||
Sbjct 18205 AA--TCACGGTCATAGTTAATGGCCGAGTTCAACTCATCCTTGTGCTTCATGACAAT--- 18259
Query 77260 CATG-ACAGTGGT--AGAAATAATTGGAGATCGTATTC-CATTTTTAGGATTAACATAGT 77315
| || | | | | ||| || || || ||| | ||| |||| || ||| |||||
Sbjct 18260 CTTGTAAACTTCTTCAGAGATCATAGGGGAT-TTCTTCTGGGTTTTTGGGTTATAATAGT 18318
Query 77316 TAAATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATA 77375
| | | ||||| || || || ||| | || || || | |||||| | ||| || |
Sbjct 18319 TGTAAAGATCTTCAATAACATCAGAGAATGGCTTCTTAGTCTGCTTGTGCAAATTAGAAA 18378
Query 77376 CGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGGT-GGCTGCT 77434
||| | ||| || || | | | ||||| || ||||| ||||| || | || ||
Sbjct 18379 TGGCAAGTCTGGCGGCCAAAGTAGCATAATCTGGATGAATGGTAGT-CATATATGCCGCA 18437
Query 77435 ATTTCTGCCGCTAAAGTATCTAATTCTATAGTAGTAACTCC 77475
|||| || | ||| | || || || ||||| ||||| ||
Sbjct 18438 GTTTCAGCAGTTAAGTTGTCCAACTCAATAGTGGTAACACC 18478
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712925684376960
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