Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq208 138 3e-27 seq423 120 7e-22 >seq208 Length=10633 Score = 138 bits (152), Expect = 3e-27 Identities = 158/211 (75%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||| ||||| |||||||||||||| || | |||||||| ||||| || | Sbjct 9472 CAAG-TGAAGAGTTGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATCCTCCA 9530 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || ||||| ||||| | |||||||| || | | |||||| ||||| || || | Sbjct 9531 ACTGCTTACCGGCAAAGATCAATCTCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGA 9590 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | ||||| |||||| | || | | |||||||| ||| || || | || ||||| || | Sbjct 9591 TCTTTTGCTTGACATTGTCAATGGTGTCTGAAGACTCCACCTCCAAGGTGATAGTCTTAC 9650 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 |||| | ||||| ||||| | |||||||| Sbjct 9651 CCGTCAAGGTCTTAACGAAAATTTGCATTTT 9681 >seq423 Length=50725 Score = 120 bits (132), Expect = 7e-22 Identities = 154/211 (73%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||| ||||| || || |||||||| || | |||||||| || || || | Sbjct 3617 CAAG-TGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGACAAAGTTCTGCCGTCCTCCA 3675 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || || ||||| | |||||||| || | | ||||| ||||| ||||| | Sbjct 3676 ACTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGGAATTCCCTCCTTGTCTTGGA 3735 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | |||||||||||| | || | |||| ||| ||| || ||||| || || || || | Sbjct 3736 TCTTTTGTTTGACATTGTCAATAGTGTCGGAAGACTCAACCTCAAGGGTGATGGTCTTAC 3795 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 | || | |||||| ||||| | |||||||| Sbjct 3796 CGGTCAAAGTCTTAACGAAAATTTGCATTTT 3826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153806341904238