Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq423 159 7e-34 seq208 147 5e-30 seq876 123 5e-23 >seq423 Length=50725 Score = 159 bits (176), Expect = 7e-34 Identities = 154/198 (78%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || || ||||||||||||| | || | ||| ||||| | || || || |||||| Sbjct 3633 TCCTTCTGAATGTTGTAGTCAGACAAAGTTCTGCCGTCCTCCAACTGCTTACCAGCAAAG 3692 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | || || ||| ||||| ||||||||||||||||||||| ||| || | Sbjct 3693 ATCAATCTCTGCTGATCAGGTGGAATTCCCTCCTTGTCTTGGATCTTTTGTTTGACATTG 3752 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || |||||||| |||| || || || || ||||| |||||||| ||||||||||||||| Sbjct 3753 TCAATAGTGTCGGAAGACTCAACCTCAAGGGTGATGGTCTTACCGGTCAAAGTCTTAACG 3812 Query 283089 AATATCTGCATTTTCATA 283106 || || |||||||| ||| Sbjct 3813 AAAATTTGCATTTTGATA 3830 >seq208 Length=10633 Score = 147 bits (162), Expect = 5e-30 Identities = 149/194 (77%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||||||||||||||||| | || | ||||||||| | || || ||||||||| Sbjct 9488 TCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATCCTCCAACTGCTTACCGGCAAAG 9547 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | || || ||| || || |||||||| || ||||||||| || || | Sbjct 9548 ATCAATCTCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTTTGCTTGACATTG 9607 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || ||||| |||| || || || | ||||| |||||||||||||| ||||||||| Sbjct 9608 TCAATGGTGTCTGAAGACTCCACCTCCAAGGTGATAGTCTTACCCGTCAAGGTCTTAACG 9667 Query 283089 AATATCTGCATTTT 283102 || || |||||||| Sbjct 9668 AAAATTTGCATTTT 9681 >seq876 Length=110562 Score = 123 bits (136), Expect = 5e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 316990 TCATGCTCAACATATGCAGTTTTCAGAATATCCTTCGTCGGGAACCCTTCCAACTGACCG 317049 || |||||||| || ||||| | |||| ||||| | ||||| || || | |||||| Sbjct 49336 TCGTGCTCAACGTAGACAGTTCTGAGAACATCCTGGGATGGGAAACCCTCAACCTGACCA 49277 Query 317050 TTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAAGACCATAC 317109 || | || ||| ||| || || ||||| |||||||| || || || |||||||| || Sbjct 49276 TTAGCCATGGCCTTCAGTAGAGTAGACTTACCAGCACCGTTAGGACCACAAAGACCGTAT 49217 Query 317110 CGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGAAGAATCTTACCACCATATGCC 317169 | | || | |||| | || | | ||||||| |||||||||| ||||||| ||| Sbjct 49216 CTTCTACCTCTTTTCAAACGAAGCTGAGACTTGTTCAAAAGAATCTTAGCACCATAAGCC 49157 Query 317170 AGAGAGAACTCACAATCACACAGGTCCTCGCCG 317202 | |||||||||||| | ||| || || || ||| Sbjct 49156 AAAGAGAACTCACAGTTACAGAGATCTTCACCG 49124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046726083703612