Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq423 159 7e-34
seq208 147 5e-30
seq876 123 5e-23
>seq423
Length=50725
Score = 159 bits (176), Expect = 7e-34
Identities = 154/198 (78%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| || || ||||||||||||| | || | ||| ||||| | || || || ||||||
Sbjct 3633 TCCTTCTGAATGTTGTAGTCAGACAAAGTTCTGCCGTCCTCCAACTGCTTACCAGCAAAG 3692
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
||||| | || || ||| ||||| ||||||||||||||||||||| ||| || |
Sbjct 3693 ATCAATCTCTGCTGATCAGGTGGAATTCCCTCCTTGTCTTGGATCTTTTGTTTGACATTG 3752
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
|| |||||||| |||| || || || || ||||| |||||||| |||||||||||||||
Sbjct 3753 TCAATAGTGTCGGAAGACTCAACCTCAAGGGTGATGGTCTTACCGGTCAAAGTCTTAACG 3812
Query 283089 AATATCTGCATTTTCATA 283106
|| || |||||||| |||
Sbjct 3813 AAAATTTGCATTTTGATA 3830
>seq208
Length=10633
Score = 147 bits (162), Expect = 5e-30
Identities = 149/194 (77%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| ||||||||||||||||||| | || | ||||||||| | || || |||||||||
Sbjct 9488 TCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATCCTCCAACTGCTTACCGGCAAAG 9547
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
||||| | || || ||| || || |||||||| || ||||||||| || || |
Sbjct 9548 ATCAATCTCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTTTGCTTGACATTG 9607
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
|| || ||||| |||| || || || | ||||| |||||||||||||| |||||||||
Sbjct 9608 TCAATGGTGTCTGAAGACTCCACCTCCAAGGTGATAGTCTTACCCGTCAAGGTCTTAACG 9667
Query 283089 AATATCTGCATTTT 283102
|| || ||||||||
Sbjct 9668 AAAATTTGCATTTT 9681
>seq876
Length=110562
Score = 123 bits (136), Expect = 5e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 316990 TCATGCTCAACATATGCAGTTTTCAGAATATCCTTCGTCGGGAACCCTTCCAACTGACCG 317049
|| |||||||| || ||||| | |||| ||||| | ||||| || || | ||||||
Sbjct 49336 TCGTGCTCAACGTAGACAGTTCTGAGAACATCCTGGGATGGGAAACCCTCAACCTGACCA 49277
Query 317050 TTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAAGACCATAC 317109
|| | || ||| ||| || || ||||| |||||||| || || || |||||||| ||
Sbjct 49276 TTAGCCATGGCCTTCAGTAGAGTAGACTTACCAGCACCGTTAGGACCACAAAGACCGTAT 49217
Query 317110 CGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGAAGAATCTTACCACCATATGCC 317169
| | || | |||| | || | | ||||||| |||||||||| ||||||| |||
Sbjct 49216 CTTCTACCTCTTTTCAAACGAAGCTGAGACTTGTTCAAAAGAATCTTAGCACCATAAGCC 49157
Query 317170 AGAGAGAACTCACAATCACACAGGTCCTCGCCG 317202
| |||||||||||| | ||| || || || |||
Sbjct 49156 AAAGAGAACTCACAGTTACAGAGATCTTCACCG 49124
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046726083703612
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |