Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq290 174 2e-38
>seq290
Length=58723
Score = 174 bits (192), Expect = 2e-38
Identities = 590/902 (65%), Gaps = 19/902 (2%)
Strand=Plus/Plus
Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTT-TCGAAAAAATTTGTCTTACCCT 23263
||||||||| || || || || ||| | |||| || || || || ||||||||
Sbjct 52784 CATAACACCAGCCTTCTGGTAGTCAGAAACTC-TCTTCTCAAAGAAGTTAGTCTTACCAG 52842
Query 23264 CTAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATG 23323
| || || || || |||||||| || |||||||| | || ||| || || | ||||
Sbjct 52843 CCAAGGAAATGTTCTCCATAAAGTCGAATGGATTGGTAGCATTGTAAACTTTCTCACATC 52902
Query 23324 ATAATTCCTTTAAAAGCCTATCTGCTACA-AATTCAATATATTGACACATCAAATCATAG 23382
|| | | | | || || || ||| ||||||| ||| || ||||| ||| ||
Sbjct 52903 CCAAAGCAATAAGCAATCTGTCGGC-ACAGAATTCAACATAATGGGCCATCATATCGAAG 52961
Query 23383 TTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTT-TCAATGGAAAC 23441
|| ||||| | | ||||| | |||||| |||| ||| || ||||| ||
Sbjct 52962 TTCATACCAAGCAAAGAAACTGGGAGAGCATCACTCCAGAA-AGTCTTCTCAATATTGAC 53020
Query 23442 AGCATCTTTAATTATTTG---AACAATAACTTCTTCACTAGGTGGATATTTTAAATACTT 23498
||| || | || |||| || |||||| ||| ||||||||||| || ||||
Sbjct 53021 AGCCTCGGTCATAATTTTCTTAATAATAAC--CTT-ACTAGGTGGATGCTTCAAATGAGA 53077
Query 23499 AAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGA 23558
||||| | ||||| |||||| |||||| || |||||||| | ||| | ||||| ||
Sbjct 53078 GAACAAGAGGCATGCGAAATCAGTATGTAGACCCTCATCCCTGCAAATAAGCTCATTGGA 53137
Query 23559 AAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCC 23618
|| || | ||| ||||| || |||| || || | ||| || || | ||||| || ||
Sbjct 53138 GAAGGTAAGTCCAGGCATCAAACCTCTCTTCTTCAACCAGAAGATAGAGGCAAACGAGCC 53197
Query 23619 GGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATT 23678
|| ||||||| |||||| | || |||||||| || | | | || | ||||
Sbjct 53198 AGAGAAGAAAACACCCTCGATGGCAGCAAAGGCGACCAATCTCTCAGCATACAAAGCATC 53257
Query 23679 ATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTC 23738
|| || |||||| | | ||| |||||| || | | ||| || |
Sbjct 53258 ATCATTGTTTATCCATCTCAAAGCCCATAGAGCCTTTTCCTTAATAGGTGGAATGGTATG 53317
Query 23739 AATTGCTTTTAAGAGAAAAGT--TTTTTCTTCATTATCTGTTATATATGTATCAATTAGT 23796
|| || || || | | ||| | |||| || || || || || || |||| ||
Sbjct 53318 GATAGCATTGAACA-AGTAGTCGGACTCCTTC-TTGTCGGTGATGTACGTTTCAAGTAAA 53375
Query 23797 AAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTA 23856
| || | ||||| || || || |||| |||||| || || ||||| |||
Sbjct 53376 AGGGAGTAGGTCTCAGAGTGGATGTTCTCAACCATAATCTGGAAACCGTAAAAGGCTCTT 53435
Query 23857 GCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCA 23916
||||| | |||||||| | || | || ||| || || || |||| ||||||||||
Sbjct 53436 GCTTCTGGTAATTGAACCTGCTTCATGAAATTTTGTGCCAAGTTCTCGTCAACAATACCA 53495
Query 23917 TCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAG--TTGATA 23974
||| ||| ||||| || || | |||| |||||| | ||| || | | || ||
Sbjct 53496 TCAGAAGCGGCAAAAAATGCCAAAACACGCGATATAAAGTATCTCTCGTTGGCATTCATC 53555
Query 23975 AT-TTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTT 24033
| || ||||| ||| | | || || || | ||||| || ||| | |||||||||
Sbjct 53556 TTGTTGTTCCAGTCAGTCAAGTCCTTAGAGAGATCAATCTCCTCAGCAGTCCAAAAAGAG 53615
Query 24034 GCCAAGGCACGCTTATACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAAT 24093
||| || |||||||||| |||| ||||||| | || || || || || || |||
Sbjct 53616 GCCTCCGCCTTCTTATACATTTGCCATATATCATCGTACTGAATAGGGAACATCACAAAT 53675
Query 24094 CT 24095
||
Sbjct 53676 CT 53677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521481624809200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |