Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq208 156 3e-33
seq423 125 5e-24
>seq208
Length=10633
Score = 156 bits (172), Expect = 3e-33
Identities = 177/233 (76%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167
|| || ||||||| |||||| |||| |||||| || |||||||||||||||||| ||
Sbjct 9449 ATACCTCCTCTCAATCTCAAGACCAAGTGAAGAGTTGACTCCTTTTGGATGTTGTAGTCA 9508
Query 44168 G-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| | | | || | || |||| |||||| |||||||||||||| | ||||||||| |
Sbjct 9509 GACAAAGTTCTGC-CATCCTCCAACTGCTTACCGGCAAAGATCAATCTCTGCTGATCAGG 9567
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGAT 44284
|| | || ||||| ||| ||||| ||||| || ||| | |||||||| | ||
Sbjct 9568 TGGGATTCCCTCCTTATCCTGGATCTTTTGCTTGACATTGT--CAATGGTGTCTGAAGAC 9625
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||||||| || || ||||| ||||| | |||||| ||||| ||||||||
Sbjct 9626 TCCACCTCCAAGGTGATAGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCAT 9678
>seq423
Length=50725
Score = 125 bits (138), Expect = 5e-24
Identities = 172/236 (73%), Gaps = 6/236 (3%)
Strand=Plus/Plus
Query 44105 TTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAA 44164
||| | || ||||||| |||||| |||| |||||| ||| |||||| || ||||||||
Sbjct 3591 TTCTTACCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAG 3650
Query 44165 TCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
|| | | | | || |||| |||| |||||| || ||||||||||| | |||||||||
Sbjct 3651 TCAGACAAAGTTCTGC-CGTCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGCTGATC 3709
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCG 44281
| || | || ||||| || ||||| || || || ||| | || |||||||
Sbjct 3710 AGGTGGAATTCCCTCCTTGTCTTGGATCTTTTGTTTGACATTGT--CAATAGTGTCGGAA 3767
Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || ||||| | || || ||||| || || | ||||| ||||| ||||||||
Sbjct 3768 GACTCAACCTCAAGGGTGATGGTCTTACCGGTCAAAGTCTTAACGAAAATTTGCAT 3823
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359986109139426
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |