Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq208 156 3e-33 seq423 125 5e-24 >seq208 Length=10633 Score = 156 bits (172), Expect = 3e-33 Identities = 177/233 (76%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || ||||||| |||||| |||| |||||| || |||||||||||||||||| || Sbjct 9449 ATACCTCCTCTCAATCTCAAGACCAAGTGAAGAGTTGACTCCTTTTGGATGTTGTAGTCA 9508 Query 44168 G-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | | | | || | || |||| |||||| |||||||||||||| | ||||||||| | Sbjct 9509 GACAAAGTTCTGC-CATCCTCCAACTGCTTACCGGCAAAGATCAATCTCTGCTGATCAGG 9567 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGAT 44284 || | || ||||| ||| ||||| ||||| || ||| | |||||||| | || Sbjct 9568 TGGGATTCCCTCCTTATCCTGGATCTTTTGCTTGACATTGT--CAATGGTGTCTGAAGAC 9625 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||||| || || ||||| ||||| | |||||| ||||| |||||||| Sbjct 9626 TCCACCTCCAAGGTGATAGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCAT 9678 >seq423 Length=50725 Score = 125 bits (138), Expect = 5e-24 Identities = 172/236 (73%), Gaps = 6/236 (3%) Strand=Plus/Plus Query 44105 TTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAA 44164 ||| | || ||||||| |||||| |||| |||||| ||| |||||| || |||||||| Sbjct 3591 TTCTTACCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAG 3650 Query 44165 TCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || | | | | || |||| |||| |||||| || ||||||||||| | ||||||||| Sbjct 3651 TCAGACAAAGTTCTGC-CGTCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGCTGATC 3709 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCG 44281 | || | || ||||| || ||||| || || || ||| | || ||||||| Sbjct 3710 AGGTGGAATTCCCTCCTTGTCTTGGATCTTTTGTTTGACATTGT--CAATAGTGTCGGAA 3767 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || ||||| | || || ||||| || || | ||||| ||||| |||||||| Sbjct 3768 GACTCAACCTCAAGGGTGATGGTCTTACCGGTCAAAGTCTTAACGAAAATTTGCAT 3823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359986109139426