Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq208 149 2e-30 seq423 125 2e-23 >seq208 Length=10633 Score = 149 bits (164), Expect = 2e-30 Identities = 170/228 (75%), Gaps = 3/228 (1%) Strand=Plus/Minus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| |||||||||| || || | || || || || |||||| | |||||||| Sbjct 9681 AAAATGC---AAATTTTCGTTAAGACCTTGACGGGTAAGACTATCACCTTGGAGGTGGAG 9625 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 ||||||||||| || || ||||| |||||||| ||||| || || |||||||| || Sbjct 9624 TCTTCAGACACCATTGACAATGTCAAGCAAAAGATCCAGGATAAGGAGGGAATCCCACCT 9565 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || ||||| || | ||||| ||||| || ||| | || ||||| || ||| | | || Sbjct 9564 GATCAGCAGAGATTGATCTTTGCCGGTAAGCAGTTGGAGGATGGCAGAACTTTGTCTGAC 9505 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || ||| ||||||| || ||||| || || | || |||||| | ||| Sbjct 9504 TACAACATCCAAAAGGAGTCAACTCTTCACTTGGTCTTGAGATTGAGA 9457 >seq423 Length=50725 Score = 125 bits (138), Expect = 2e-23 Identities = 165/228 (72%), Gaps = 3/228 (1%) Strand=Plus/Minus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| |||||||||| || ||| | || || || || |||||||| ||||| || Sbjct 3826 AAAATGC---AAATTTTCGTTAAGACTTTGACCGGTAAGACCATCACCCTTGAGGTTGAG 3770 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 || ||||| || || || |||||||||||||| || ||||| || ||||| || || Sbjct 3769 TCTTCCGACACTATTGACAATGTCAAACAAAAGATCCAAGACAAGGAGGGAATTCCACCT 3710 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || ||||| || | ||||| || || || ||| | || || || || ||| | | || Sbjct 3709 GATCAGCAGAGATTGATCTTTGCTGGTAAGCAGTTGGAGGACGGCAGAACTTTGTCTGAC 3650 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || ||| | || || || || || || || | ||||||||| | ||| Sbjct 3649 TACAACATTCAGAAGGAGTCCACTCTTCACTTGGTTTTGAGATTGAGA 3602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203716116495732