Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq423 98.7 9e-16 seq208 89.7 5e-13 >seq423 Length=50725 Score = 98.7 bits (108), Expect = 9e-16 Identities = 153/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 || |||| || || ||| ||||||||||||||| ||||| || | || | |||| Sbjct 3612 AAAACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGACAAAGTTCTGCCGTCC 3671 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || | |||||| || || || |||| | ||| || || | |||| | ||||||||| Sbjct 3672 TCCAACTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGGAATTCCCTCCTTGTCT 3731 Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 ||| ||||| || || | | | ||||||| ||||| ||||| | || || || Sbjct 3732 TGGATCTTTTG-TTTGACATTGTCAATAGTGTCGGAAGACTCAACCTCAAGGGTGATGGT 3790 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||||| |||| ||||| |||||||| ||||| || Sbjct 3791 CTTACCGGTCAAAGTCTTAACGAAAATTTGCATTTT 3826 >seq208 Length=10633 Score = 89.7 bits (98), Expect = 5e-13 Identities = 139/196 (71%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 |||||| || ||||| ||||| || | || | | || || | |||||| ||||| || Sbjct 9487 CTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATCCTCCAACTGCTTACCGGCAAA 9546 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 |||| | ||| || || | || | | |||||| ||| ||| |||||||| | | Sbjct 9547 GATCAATCTCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTTTGCTTGA-CAT 9605 Query 41791 CGACACAG-TGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 | || | |||| ||||||||||||| || || || |||||||||| ||||| | Sbjct 9606 TGTCAATGGTGTCTGAAGACTCCACCTCCAAGGTGATAGTCTTACCCGTCAAGGTCTTAA 9665 Query 41850 CGAAAATCTGCATGTT 41865 ||||||| ||||| || Sbjct 9666 CGAAAATTTGCATTTT 9681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462298348333600