Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq423 98.7 9e-16
seq208 89.7 5e-13
>seq423
Length=50725
Score = 98.7 bits (108), Expect = 9e-16
Identities = 153/216 (71%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710
|| |||| || || ||| ||||||||||||||| ||||| || | || | ||||
Sbjct 3612 AAAACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGACAAAGTTCTGCCGTCC 3671
Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770
|| | |||||| || || || |||| | ||| || || | |||| | |||||||||
Sbjct 3672 TCCAACTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGGAATTCCCTCCTTGTCT 3731
Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829
||| ||||| || || | | | ||||||| ||||| ||||| | || || ||
Sbjct 3732 TGGATCTTTTG-TTTGACATTGTCAATAGTGTCGGAAGACTCAACCTCAAGGGTGATGGT 3790
Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
||||| |||| ||||| |||||||| ||||| ||
Sbjct 3791 CTTACCGGTCAAAGTCTTAACGAAAATTTGCATTTT 3826
>seq208
Length=10633
Score = 89.7 bits (98), Expect = 5e-13
Identities = 139/196 (71%), Gaps = 2/196 (1%)
Strand=Plus/Plus
Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730
|||||| || ||||| ||||| || | || | | || || | |||||| ||||| ||
Sbjct 9487 CTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATCCTCCAACTGCTTACCGGCAAA 9546
Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790
|||| | ||| || || | || | | |||||| ||| ||| |||||||| | |
Sbjct 9547 GATCAATCTCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTTTGCTTGA-CAT 9605
Query 41791 CGACACAG-TGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849
| || | |||| ||||||||||||| || || || |||||||||| ||||| |
Sbjct 9606 TGTCAATGGTGTCTGAAGACTCCACCTCCAAGGTGATAGTCTTACCCGTCAAGGTCTTAA 9665
Query 41850 CGAAAATCTGCATGTT 41865
||||||| ||||| ||
Sbjct 9666 CGAAAATTTGCATTTT 9681
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462298348333600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |